Protein–RNA interactions for Protein: Q91VD8

Pcdhb17, MCG141290, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb17Q91VD8 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC14.39□□□□□ -0.11
Pcdhb17Q91VD8 Obox1-206ENSMUST00000181001 1217 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Pcdhb17Q91VD8 Gm8927-201ENSMUST00000181978 981 ntBASIC14.39□□□□□ -0.11
Pcdhb17Q91VD8 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Pcdhb17Q91VD8 4930521E06Rik-201ENSMUST00000186732 905 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhb17Q91VD8 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhb17Q91VD8 Gm38154-201ENSMUST00000195444 340 ntBASIC14.39□□□□□ -0.11
Pcdhb17Q91VD8 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhb17Q91VD8 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhb17Q91VD8 Gm7730-201ENSMUST00000212486 454 ntBASIC14.39□□□□□ -0.11
Pcdhb17Q91VD8 AC116797.2-202ENSMUST00000223587 1017 ntBASIC14.39□□□□□ -0.11
Pcdhb17Q91VD8 Stfa2-201ENSMUST00000023619 423 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhb17Q91VD8 Lxn-201ENSMUST00000058981 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhb17Q91VD8 Gm3222-201ENSMUST00000071282 990 ntBASIC14.39□□□□□ -0.11
Pcdhb17Q91VD8 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhb17Q91VD8 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Pcdhb17Q91VD8 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhb17Q91VD8 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Pcdhb17Q91VD8 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhb17Q91VD8 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC14.39□□□□□ -0.11
Pcdhb17Q91VD8 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Pcdhb17Q91VD8 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhb17Q91VD8 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Pcdhb17Q91VD8 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC14.39□□□□□ -0.11
Pcdhb17Q91VD8 Gm21451-201ENSMUST00000111062 2775 ntBASIC14.39□□□□□ -0.11
Pcdhb17Q91VD8 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Pcdhb17Q91VD8 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb17Q91VD8 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb17Q91VD8 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb17Q91VD8 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb17Q91VD8 Olfr987-203ENSMUST00000216347 1453 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Pcdhb17Q91VD8 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb17Q91VD8 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb17Q91VD8 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC14.38□□□□□ -0.11
Pcdhb17Q91VD8 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb17Q91VD8 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb17Q91VD8 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Pcdhb17Q91VD8 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb17Q91VD8 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb17Q91VD8 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb17Q91VD8 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb17Q91VD8 Mir698-201ENSMUST00000102164 109 ntBASIC14.38□□□□□ -0.11
Pcdhb17Q91VD8 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb17Q91VD8 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC14.38□□□□□ -0.11
Pcdhb17Q91VD8 Gm15741-201ENSMUST00000119401 754 ntBASIC14.38□□□□□ -0.11
Pcdhb17Q91VD8 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC14.38□□□□□ -0.11
Pcdhb17Q91VD8 4930440I19Rik-202ENSMUST00000145972 676 ntTSL 2 BASIC14.38□□□□□ -0.11
Pcdhb17Q91VD8 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb17Q91VD8 Gm16215-201ENSMUST00000161990 637 ntBASIC14.38□□□□□ -0.11
Pcdhb17Q91VD8 Gm17075-201ENSMUST00000171924 670 ntBASIC14.38□□□□□ -0.11
Pcdhb17Q91VD8 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb17Q91VD8 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC14.38□□□□□ -0.11
Pcdhb17Q91VD8 Gm8869-201ENSMUST00000195222 947 ntBASIC14.38□□□□□ -0.11
Pcdhb17Q91VD8 Gm37676-201ENSMUST00000195496 507 ntBASIC14.38□□□□□ -0.11
Pcdhb17Q91VD8 Gm45258-201ENSMUST00000210042 853 ntBASIC14.38□□□□□ -0.11
Pcdhb17Q91VD8 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC14.38□□□□□ -0.11
Pcdhb17Q91VD8 Gm7684-201ENSMUST00000211891 829 ntBASIC14.38□□□□□ -0.11
Pcdhb17Q91VD8 Gm34165-201ENSMUST00000222012 1174 ntBASIC14.38□□□□□ -0.11
Pcdhb17Q91VD8 Gm5626-201ENSMUST00000222151 1058 ntBASIC14.38□□□□□ -0.11
Pcdhb17Q91VD8 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb17Q91VD8 Olfr926-201ENSMUST00000078289 1051 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Pcdhb17Q91VD8 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC14.38□□□□□ -0.11
Pcdhb17Q91VD8 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Pcdhb17Q91VD8 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb17Q91VD8 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb17Q91VD8 Gm37082-201ENSMUST00000192629 1927 ntBASIC14.38□□□□□ -0.11
Pcdhb17Q91VD8 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb17Q91VD8 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb17Q91VD8 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb17Q91VD8 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb17Q91VD8 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb17Q91VD8 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Pcdhb17Q91VD8 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb17Q91VD8 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb17Q91VD8 AC168058.1-201ENSMUST00000219521 2282 ntBASIC14.38□□□□□ -0.11
Pcdhb17Q91VD8 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhb17Q91VD8 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhb17Q91VD8 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhb17Q91VD8 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhb17Q91VD8 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhb17Q91VD8 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhb17Q91VD8 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC14.37□□□□□ -0.11
Pcdhb17Q91VD8 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhb17Q91VD8 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhb17Q91VD8 Gm42690-201ENSMUST00000197921 1836 ntBASIC14.37□□□□□ -0.11
Pcdhb17Q91VD8 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC14.37□□□□□ -0.11
Pcdhb17Q91VD8 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhb17Q91VD8 Prl2c1-202ENSMUST00000110335 852 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Pcdhb17Q91VD8 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Pcdhb17Q91VD8 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhb17Q91VD8 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC14.37□□□□□ -0.11
Pcdhb17Q91VD8 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhb17Q91VD8 4930577H14Rik-201ENSMUST00000151367 790 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhb17Q91VD8 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC14.37□□□□□ -0.11
Pcdhb17Q91VD8 Gm24420-201ENSMUST00000176676 59 ntBASIC14.37□□□□□ -0.11
Pcdhb17Q91VD8 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC14.37□□□□□ -0.11
Pcdhb17Q91VD8 Gm26801-202ENSMUST00000193187 610 ntTSL 3 BASIC14.37□□□□□ -0.11
Pcdhb17Q91VD8 Gm38117-201ENSMUST00000194653 939 ntBASIC14.37□□□□□ -0.11
Pcdhb17Q91VD8 Gm8920-201ENSMUST00000196153 924 ntBASIC14.37□□□□□ -0.11
Pcdhb17Q91VD8 Tmbim7-204ENSMUST00000198739 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms