Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Trim60Q8VI40 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim60Q8VI40 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim60Q8VI40 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim60Q8VI40 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim60Q8VI40 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trim60Q8VI40 Gm37644-201ENSMUST00000192190 2270 ntBASIC13.99□□□□□ -0.17
Trim60Q8VI40 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim60Q8VI40 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim60Q8VI40 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim60Q8VI40 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Trim60Q8VI40 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Trim60Q8VI40 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim60Q8VI40 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim60Q8VI40 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trim60Q8VI40 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trim60Q8VI40 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim60Q8VI40 AC124751.1-201ENSMUST00000222716 1408 ntBASIC13.98□□□□□ -0.17
Trim60Q8VI40 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim60Q8VI40 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trim60Q8VI40 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim60Q8VI40 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
Trim60Q8VI40 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim60Q8VI40 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim60Q8VI40 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim60Q8VI40 AC121805.2-201ENSMUST00000218808 2538 ntBASIC13.98□□□□□ -0.17
Trim60Q8VI40 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim60Q8VI40 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim60Q8VI40 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim60Q8VI40 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim60Q8VI40 Gm7899-201ENSMUST00000192935 1897 ntBASIC13.98□□□□□ -0.17
Trim60Q8VI40 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim60Q8VI40 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trim60Q8VI40 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim60Q8VI40 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim60Q8VI40 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC13.98□□□□□ -0.17
Trim60Q8VI40 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trim60Q8VI40 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC13.98□□□□□ -0.17
Trim60Q8VI40 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trim60Q8VI40 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC13.98□□□□□ -0.17
Trim60Q8VI40 Gm27430-201ENSMUST00000184585 107 ntBASIC13.98□□□□□ -0.17
Trim60Q8VI40 Gm44333-201ENSMUST00000197168 107 ntBASIC13.98□□□□□ -0.17
Trim60Q8VI40 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim60Q8VI40 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Trim60Q8VI40 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim60Q8VI40 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim60Q8VI40 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim60Q8VI40 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC13.98□□□□□ -0.17
Trim60Q8VI40 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim60Q8VI40 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim60Q8VI40 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim60Q8VI40 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim60Q8VI40 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim60Q8VI40 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim60Q8VI40 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim60Q8VI40 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim60Q8VI40 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trim60Q8VI40 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim60Q8VI40 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trim60Q8VI40 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.17
Trim60Q8VI40 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Trim60Q8VI40 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim60Q8VI40 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trim60Q8VI40 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim60Q8VI40 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim60Q8VI40 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC13.97□□□□□ -0.17
Trim60Q8VI40 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim60Q8VI40 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
Trim60Q8VI40 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Trim60Q8VI40 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC13.97□□□□□ -0.17
Trim60Q8VI40 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim60Q8VI40 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim60Q8VI40 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim60Q8VI40 Gm7336-201ENSMUST00000107041 1232 ntBASIC13.97□□□□□ -0.17
Trim60Q8VI40 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC13.97□□□□□ -0.17
Trim60Q8VI40 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC13.97□□□□□ -0.17
Trim60Q8VI40 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC13.97□□□□□ -0.17
Trim60Q8VI40 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC13.97□□□□□ -0.17
Trim60Q8VI40 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC13.97□□□□□ -0.17
Trim60Q8VI40 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim60Q8VI40 Gm3695-201ENSMUST00000087222 1009 ntBASIC13.97□□□□□ -0.17
Trim60Q8VI40 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim60Q8VI40 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim60Q8VI40 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim60Q8VI40 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim60Q8VI40 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim60Q8VI40 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trim60Q8VI40 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Trim60Q8VI40 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Trim60Q8VI40 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim60Q8VI40 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC13.97□□□□□ -0.17
Trim60Q8VI40 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim60Q8VI40 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trim60Q8VI40 Gm44891-201ENSMUST00000208817 2223 ntBASIC13.96□□□□□ -0.17
Trim60Q8VI40 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC13.96□□□□□ -0.17
Trim60Q8VI40 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trim60Q8VI40 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trim60Q8VI40 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Trim60Q8VI40 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trim60Q8VI40 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms