Protein–RNA interactions for Protein: Q8R3Q6

Ccdc58, Coiled-coil domain-containing protein 58, mousemouse

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc58Q8R3Q6 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC12.12□□□□□ -0.47
Ccdc58Q8R3Q6 Gm29741-201ENSMUST00000192667 421 ntBASIC12.12□□□□□ -0.47
Ccdc58Q8R3Q6 Psmb5-202ENSMUST00000227257 622 ntBASIC12.12□□□□□ -0.47
Ccdc58Q8R3Q6 AC149294.4-201ENSMUST00000227870 882 ntBASIC12.12□□□□□ -0.47
Ccdc58Q8R3Q6 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc58Q8R3Q6 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc58Q8R3Q6 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc58Q8R3Q6 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc58Q8R3Q6 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Ccdc58Q8R3Q6 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc58Q8R3Q6 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
Ccdc58Q8R3Q6 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc58Q8R3Q6 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc58Q8R3Q6 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc58Q8R3Q6 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Ccdc58Q8R3Q6 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc58Q8R3Q6 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc58Q8R3Q6 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc58Q8R3Q6 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc58Q8R3Q6 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
Ccdc58Q8R3Q6 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc58Q8R3Q6 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc58Q8R3Q6 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc58Q8R3Q6 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc58Q8R3Q6 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Ccdc58Q8R3Q6 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Ccdc58Q8R3Q6 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc58Q8R3Q6 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc58Q8R3Q6 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC12.11□□□□□ -0.47
Ccdc58Q8R3Q6 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc58Q8R3Q6 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Ccdc58Q8R3Q6 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc58Q8R3Q6 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Ccdc58Q8R3Q6 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc58Q8R3Q6 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc58Q8R3Q6 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc58Q8R3Q6 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Ccdc58Q8R3Q6 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC12.11□□□□□ -0.47
Ccdc58Q8R3Q6 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc58Q8R3Q6 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc58Q8R3Q6 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc58Q8R3Q6 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc58Q8R3Q6 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc58Q8R3Q6 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc58Q8R3Q6 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc58Q8R3Q6 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC12.11□□□□□ -0.47
Ccdc58Q8R3Q6 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc58Q8R3Q6 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc58Q8R3Q6 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc58Q8R3Q6 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc58Q8R3Q6 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc58Q8R3Q6 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc58Q8R3Q6 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc58Q8R3Q6 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc58Q8R3Q6 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC12.11□□□□□ -0.47
Ccdc58Q8R3Q6 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC12.11□□□□□ -0.47
Ccdc58Q8R3Q6 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Ccdc58Q8R3Q6 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc58Q8R3Q6 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc58Q8R3Q6 Gm38114-201ENSMUST00000191877 1232 ntBASIC12.11□□□□□ -0.47
Ccdc58Q8R3Q6 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc58Q8R3Q6 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC12.11□□□□□ -0.47
Ccdc58Q8R3Q6 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC12.11□□□□□ -0.47
Ccdc58Q8R3Q6 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Ccdc58Q8R3Q6 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC12.11□□□□□ -0.47
Ccdc58Q8R3Q6 AC158529.1-201ENSMUST00000223618 239 ntBASIC12.11□□□□□ -0.47
Ccdc58Q8R3Q6 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc58Q8R3Q6 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc58Q8R3Q6 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc58Q8R3Q6 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Ccdc58Q8R3Q6 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc58Q8R3Q6 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC12.11□□□□□ -0.47
Ccdc58Q8R3Q6 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Ccdc58Q8R3Q6 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc58Q8R3Q6 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc58Q8R3Q6 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Ccdc58Q8R3Q6 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc58Q8R3Q6 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc58Q8R3Q6 Gm17435-202ENSMUST00000212699 1998 ntBASIC12.1□□□□□ -0.47
Ccdc58Q8R3Q6 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Ccdc58Q8R3Q6 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc58Q8R3Q6 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc58Q8R3Q6 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc58Q8R3Q6 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc58Q8R3Q6 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc58Q8R3Q6 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc58Q8R3Q6 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc58Q8R3Q6 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc58Q8R3Q6 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc58Q8R3Q6 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc58Q8R3Q6 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc58Q8R3Q6 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc58Q8R3Q6 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC12.1□□□□□ -0.47
Ccdc58Q8R3Q6 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC12.1□□□□□ -0.47
Ccdc58Q8R3Q6 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc58Q8R3Q6 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC12.1□□□□□ -0.47
Ccdc58Q8R3Q6 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC12.1□□□□□ -0.47
Ccdc58Q8R3Q6 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC12.1□□□□□ -0.47
Ccdc58Q8R3Q6 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc58Q8R3Q6 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms