Protein–RNA interactions for Protein: Q8CI96

Clip4, CAP-Gly domain-containing linker protein 4, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip4Q8CI96 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Clip4Q8CI96 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Clip4Q8CI96 Gm14371-201ENSMUST00000138925 1518 ntBASIC13.64□□□□□ -0.23
Clip4Q8CI96 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Clip4Q8CI96 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Clip4Q8CI96 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Clip4Q8CI96 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Clip4Q8CI96 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Clip4Q8CI96 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Clip4Q8CI96 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Clip4Q8CI96 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Clip4Q8CI96 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Clip4Q8CI96 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Clip4Q8CI96 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC13.63□□□□□ -0.23
Clip4Q8CI96 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Clip4Q8CI96 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Clip4Q8CI96 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Clip4Q8CI96 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Clip4Q8CI96 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Clip4Q8CI96 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Clip4Q8CI96 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Clip4Q8CI96 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Clip4Q8CI96 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Clip4Q8CI96 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Clip4Q8CI96 Gm7488-201ENSMUST00000117148 684 ntBASIC13.63□□□□□ -0.23
Clip4Q8CI96 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC13.63□□□□□ -0.23
Clip4Q8CI96 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC13.63□□□□□ -0.23
Clip4Q8CI96 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC13.63□□□□□ -0.23
Clip4Q8CI96 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Clip4Q8CI96 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Clip4Q8CI96 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Clip4Q8CI96 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC13.63□□□□□ -0.23
Clip4Q8CI96 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Clip4Q8CI96 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Clip4Q8CI96 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Clip4Q8CI96 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Clip4Q8CI96 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Clip4Q8CI96 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
Clip4Q8CI96 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Clip4Q8CI96 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Clip4Q8CI96 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC13.63□□□□□ -0.23
Clip4Q8CI96 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Clip4Q8CI96 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Clip4Q8CI96 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Clip4Q8CI96 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Clip4Q8CI96 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Clip4Q8CI96 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Clip4Q8CI96 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Clip4Q8CI96 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Clip4Q8CI96 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Clip4Q8CI96 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC13.62□□□□□ -0.23
Clip4Q8CI96 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Clip4Q8CI96 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Clip4Q8CI96 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Clip4Q8CI96 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Clip4Q8CI96 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
Clip4Q8CI96 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC13.62□□□□□ -0.23
Clip4Q8CI96 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC13.62□□□□□ -0.23
Clip4Q8CI96 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC13.62□□□□□ -0.23
Clip4Q8CI96 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Clip4Q8CI96 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Clip4Q8CI96 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Clip4Q8CI96 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC13.62□□□□□ -0.23
Clip4Q8CI96 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Clip4Q8CI96 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Clip4Q8CI96 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Clip4Q8CI96 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Clip4Q8CI96 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Clip4Q8CI96 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Clip4Q8CI96 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Clip4Q8CI96 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Clip4Q8CI96 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Clip4Q8CI96 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC13.62□□□□□ -0.23
Clip4Q8CI96 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC13.62□□□□□ -0.23
Clip4Q8CI96 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Clip4Q8CI96 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Clip4Q8CI96 AC126549.2-201ENSMUST00000223997 1976 ntBASIC13.62□□□□□ -0.23
Clip4Q8CI96 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC13.61□□□□□ -0.23
Clip4Q8CI96 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Clip4Q8CI96 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
Clip4Q8CI96 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Clip4Q8CI96 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Clip4Q8CI96 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Clip4Q8CI96 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Clip4Q8CI96 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Clip4Q8CI96 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC13.61□□□□□ -0.23
Clip4Q8CI96 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Clip4Q8CI96 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Clip4Q8CI96 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Clip4Q8CI96 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Clip4Q8CI96 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Clip4Q8CI96 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Clip4Q8CI96 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Clip4Q8CI96 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Clip4Q8CI96 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Clip4Q8CI96 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Clip4Q8CI96 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC13.61□□□□□ -0.23
Clip4Q8CI96 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC13.61□□□□□ -0.23
Clip4Q8CI96 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Clip4Q8CI96 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms