Protein–RNA interactions for Protein: Q8CG80

Shf, SH2 domain-containing adapter protein F, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShfQ8CG80 Gm27772-201ENSMUST00000184900 187 ntBASIC12.07□□□□□ -0.48
ShfQ8CG80 Gm2756-201ENSMUST00000195851 400 ntBASIC12.07□□□□□ -0.48
ShfQ8CG80 Gm43703-201ENSMUST00000200523 763 ntBASIC12.07□□□□□ -0.48
ShfQ8CG80 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
ShfQ8CG80 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
ShfQ8CG80 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
ShfQ8CG80 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
ShfQ8CG80 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
ShfQ8CG80 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC12.07□□□□□ -0.48
ShfQ8CG80 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC12.07□□□□□ -0.48
ShfQ8CG80 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
ShfQ8CG80 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC12.07□□□□□ -0.48
ShfQ8CG80 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
ShfQ8CG80 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
ShfQ8CG80 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC12.07□□□□□ -0.48
ShfQ8CG80 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
ShfQ8CG80 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC12.07□□□□□ -0.48
ShfQ8CG80 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
ShfQ8CG80 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
ShfQ8CG80 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
ShfQ8CG80 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC12.06□□□□□ -0.48
ShfQ8CG80 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
ShfQ8CG80 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
ShfQ8CG80 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
ShfQ8CG80 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC12.06□□□□□ -0.48
ShfQ8CG80 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
ShfQ8CG80 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
ShfQ8CG80 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
ShfQ8CG80 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
ShfQ8CG80 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
ShfQ8CG80 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC12.06□□□□□ -0.48
ShfQ8CG80 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC12.06□□□□□ -0.48
ShfQ8CG80 Mir7221-201ENSMUST00000184009 72 ntBASIC12.06□□□□□ -0.48
ShfQ8CG80 Gm27321-201ENSMUST00000185021 205 ntBASIC12.06□□□□□ -0.48
ShfQ8CG80 Gm44344-201ENSMUST00000200287 129 ntBASIC12.06□□□□□ -0.48
ShfQ8CG80 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
ShfQ8CG80 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
ShfQ8CG80 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
ShfQ8CG80 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
ShfQ8CG80 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
ShfQ8CG80 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
ShfQ8CG80 Gm10305-201ENSMUST00000195331 2475 ntBASIC12.06□□□□□ -0.48
ShfQ8CG80 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
ShfQ8CG80 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
ShfQ8CG80 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
ShfQ8CG80 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
ShfQ8CG80 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
ShfQ8CG80 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
ShfQ8CG80 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
ShfQ8CG80 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC12.06□□□□□ -0.48
ShfQ8CG80 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
ShfQ8CG80 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
ShfQ8CG80 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
ShfQ8CG80 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
ShfQ8CG80 AC137842.1-201ENSMUST00000227896 2064 ntBASIC12.06□□□□□ -0.48
ShfQ8CG80 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
ShfQ8CG80 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
ShfQ8CG80 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
ShfQ8CG80 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
ShfQ8CG80 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
ShfQ8CG80 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
ShfQ8CG80 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
ShfQ8CG80 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC12.05□□□□□ -0.48
ShfQ8CG80 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
ShfQ8CG80 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
ShfQ8CG80 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
ShfQ8CG80 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
ShfQ8CG80 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
ShfQ8CG80 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
ShfQ8CG80 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
ShfQ8CG80 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
ShfQ8CG80 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
ShfQ8CG80 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC12.05□□□□□ -0.48
ShfQ8CG80 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC12.05□□□□□ -0.48
ShfQ8CG80 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
ShfQ8CG80 Gm18905-201ENSMUST00000205454 928 ntBASIC12.05□□□□□ -0.48
ShfQ8CG80 Gm45841-201ENSMUST00000207700 164 ntBASIC12.05□□□□□ -0.48
ShfQ8CG80 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
ShfQ8CG80 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
ShfQ8CG80 Gm8396-201ENSMUST00000057361 823 ntBASIC12.05□□□□□ -0.48
ShfQ8CG80 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
ShfQ8CG80 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
ShfQ8CG80 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
ShfQ8CG80 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
ShfQ8CG80 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
ShfQ8CG80 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
ShfQ8CG80 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
ShfQ8CG80 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC12.05□□□□□ -0.48
ShfQ8CG80 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC12.05□□□□□ -0.48
ShfQ8CG80 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
ShfQ8CG80 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
ShfQ8CG80 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
ShfQ8CG80 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
ShfQ8CG80 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
ShfQ8CG80 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
ShfQ8CG80 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC12.04□□□□□ -0.48
ShfQ8CG80 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
ShfQ8CG80 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
ShfQ8CG80 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
ShfQ8CG80 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms