Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc28aQ8CEI3 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc28aQ8CEI3 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc28aQ8CEI3 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc28aQ8CEI3 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc28aQ8CEI3 Gm15653-201ENSMUST00000119247 907 ntBASIC14.25□□□□□ -0.13
Ccdc28aQ8CEI3 Gm13385-201ENSMUST00000121089 220 ntBASIC14.25□□□□□ -0.13
Ccdc28aQ8CEI3 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC14.25□□□□□ -0.13
Ccdc28aQ8CEI3 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC14.25□□□□□ -0.13
Ccdc28aQ8CEI3 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc28aQ8CEI3 Gm25911-201ENSMUST00000157621 56 ntBASIC14.25□□□□□ -0.13
Ccdc28aQ8CEI3 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Ccdc28aQ8CEI3 Gm5264-201ENSMUST00000190584 848 ntBASIC14.25□□□□□ -0.13
Ccdc28aQ8CEI3 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
Ccdc28aQ8CEI3 Ndufaf2-202ENSMUST00000223734 556 ntBASIC14.25□□□□□ -0.13
Ccdc28aQ8CEI3 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc28aQ8CEI3 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc28aQ8CEI3 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc28aQ8CEI3 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC14.25□□□□□ -0.13
Ccdc28aQ8CEI3 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc28aQ8CEI3 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc28aQ8CEI3 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
Ccdc28aQ8CEI3 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc28aQ8CEI3 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc28aQ8CEI3 Tmed9-203ENSMUST00000224741 1450 ntBASIC14.25□□□□□ -0.13
Ccdc28aQ8CEI3 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc28aQ8CEI3 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc28aQ8CEI3 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc28aQ8CEI3 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc28aQ8CEI3 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC14.24□□□□□ -0.13
Ccdc28aQ8CEI3 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc28aQ8CEI3 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
Ccdc28aQ8CEI3 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc28aQ8CEI3 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC14.24□□□□□ -0.13
Ccdc28aQ8CEI3 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC14.24□□□□□ -0.13
Ccdc28aQ8CEI3 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc28aQ8CEI3 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc28aQ8CEI3 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc28aQ8CEI3 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc28aQ8CEI3 Gm22065-201ENSMUST00000103753 110 ntBASIC14.24□□□□□ -0.13
Ccdc28aQ8CEI3 Gm22066-201ENSMUST00000103761 110 ntBASIC14.24□□□□□ -0.13
Ccdc28aQ8CEI3 Gm24932-201ENSMUST00000103763 110 ntBASIC14.24□□□□□ -0.13
Ccdc28aQ8CEI3 Gm24115-201ENSMUST00000103799 110 ntBASIC14.24□□□□□ -0.13
Ccdc28aQ8CEI3 Gm22190-201ENSMUST00000103827 110 ntBASIC14.24□□□□□ -0.13
Ccdc28aQ8CEI3 Gm22191-201ENSMUST00000103831 110 ntBASIC14.24□□□□□ -0.13
Ccdc28aQ8CEI3 Gm24721-201ENSMUST00000103849 110 ntBASIC14.24□□□□□ -0.13
Ccdc28aQ8CEI3 Gm28018-201ENSMUST00000103869 110 ntBASIC14.24□□□□□ -0.13
Ccdc28aQ8CEI3 Gm26399-201ENSMUST00000103937 110 ntBASIC14.24□□□□□ -0.13
Ccdc28aQ8CEI3 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc28aQ8CEI3 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC14.24□□□□□ -0.13
Ccdc28aQ8CEI3 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc28aQ8CEI3 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc28aQ8CEI3 Gm24158-201ENSMUST00000175263 71 ntBASIC14.24□□□□□ -0.13
Ccdc28aQ8CEI3 Gm25349-201ENSMUST00000177728 110 ntBASIC14.24□□□□□ -0.13
Ccdc28aQ8CEI3 Gm23616-201ENSMUST00000177797 110 ntBASIC14.24□□□□□ -0.13
Ccdc28aQ8CEI3 Gm25871-201ENSMUST00000177816 110 ntBASIC14.24□□□□□ -0.13
Ccdc28aQ8CEI3 Gm24752-201ENSMUST00000178240 110 ntBASIC14.24□□□□□ -0.13
Ccdc28aQ8CEI3 Gm24496-201ENSMUST00000178287 110 ntBASIC14.24□□□□□ -0.13
Ccdc28aQ8CEI3 Gm25649-201ENSMUST00000178476 110 ntBASIC14.24□□□□□ -0.13
Ccdc28aQ8CEI3 Gm25548-201ENSMUST00000178681 110 ntBASIC14.24□□□□□ -0.13
Ccdc28aQ8CEI3 Gm23147-201ENSMUST00000178841 110 ntBASIC14.24□□□□□ -0.13
Ccdc28aQ8CEI3 Gm26095-201ENSMUST00000179270 110 ntBASIC14.24□□□□□ -0.13
Ccdc28aQ8CEI3 Gm22171-201ENSMUST00000179283 110 ntBASIC14.24□□□□□ -0.13
Ccdc28aQ8CEI3 Gm23936-201ENSMUST00000179354 110 ntBASIC14.24□□□□□ -0.13
Ccdc28aQ8CEI3 Gm22619-201ENSMUST00000179516 110 ntBASIC14.24□□□□□ -0.13
Ccdc28aQ8CEI3 Gm25255-201ENSMUST00000179579 110 ntBASIC14.24□□□□□ -0.13
Ccdc28aQ8CEI3 Gm24755-201ENSMUST00000179691 110 ntBASIC14.24□□□□□ -0.13
Ccdc28aQ8CEI3 Gm26506-201ENSMUST00000179692 110 ntBASIC14.24□□□□□ -0.13
Ccdc28aQ8CEI3 Gm25086-201ENSMUST00000179931 110 ntBASIC14.24□□□□□ -0.13
Ccdc28aQ8CEI3 Gm23243-201ENSMUST00000180047 110 ntBASIC14.24□□□□□ -0.13
Ccdc28aQ8CEI3 Gm24659-201ENSMUST00000180212 110 ntBASIC14.24□□□□□ -0.13
Ccdc28aQ8CEI3 Gm24169-201ENSMUST00000180244 110 ntBASIC14.24□□□□□ -0.13
Ccdc28aQ8CEI3 Gm23689-201ENSMUST00000180354 110 ntBASIC14.24□□□□□ -0.13
Ccdc28aQ8CEI3 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc28aQ8CEI3 Gm27359-201ENSMUST00000184153 110 ntBASIC14.24□□□□□ -0.13
Ccdc28aQ8CEI3 Gm27785-201ENSMUST00000184268 110 ntBASIC14.24□□□□□ -0.13
Ccdc28aQ8CEI3 Gm27466-201ENSMUST00000184396 110 ntBASIC14.24□□□□□ -0.13
Ccdc28aQ8CEI3 Gm27703-201ENSMUST00000184836 110 ntBASIC14.24□□□□□ -0.13
Ccdc28aQ8CEI3 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc28aQ8CEI3 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Ccdc28aQ8CEI3 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc28aQ8CEI3 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc28aQ8CEI3 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc28aQ8CEI3 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Ccdc28aQ8CEI3 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc28aQ8CEI3 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Ccdc28aQ8CEI3 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc28aQ8CEI3 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Ccdc28aQ8CEI3 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc28aQ8CEI3 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc28aQ8CEI3 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Ccdc28aQ8CEI3 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Ccdc28aQ8CEI3 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Ccdc28aQ8CEI3 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc28aQ8CEI3 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc28aQ8CEI3 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
Ccdc28aQ8CEI3 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc28aQ8CEI3 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc28aQ8CEI3 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc28aQ8CEI3 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms