Protein–RNA interactions for Protein: Q8CE13

Ccdc17, Coiled-coil domain-containing protein 17, mousemouse

Predictions only

Length 565 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc17Q8CE13 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc17Q8CE13 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc17Q8CE13 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc17Q8CE13 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc17Q8CE13 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Ccdc17Q8CE13 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc17Q8CE13 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc17Q8CE13 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc17Q8CE13 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ccdc17Q8CE13 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
Ccdc17Q8CE13 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ccdc17Q8CE13 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC14.02□□□□□ -0.16
Ccdc17Q8CE13 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ccdc17Q8CE13 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ccdc17Q8CE13 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.16
Ccdc17Q8CE13 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
Ccdc17Q8CE13 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ccdc17Q8CE13 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ccdc17Q8CE13 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ccdc17Q8CE13 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ccdc17Q8CE13 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC14.02□□□□□ -0.16
Ccdc17Q8CE13 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Ccdc17Q8CE13 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ccdc17Q8CE13 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ccdc17Q8CE13 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc17Q8CE13 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc17Q8CE13 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc17Q8CE13 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.17
Ccdc17Q8CE13 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC14.02□□□□□ -0.17
Ccdc17Q8CE13 Gm11803-201ENSMUST00000119966 444 ntBASIC14.02□□□□□ -0.17
Ccdc17Q8CE13 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc17Q8CE13 Gm8810-201ENSMUST00000172895 754 ntBASIC14.02□□□□□ -0.17
Ccdc17Q8CE13 Gm24196-201ENSMUST00000179161 110 ntBASIC14.02□□□□□ -0.17
Ccdc17Q8CE13 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC14.02□□□□□ -0.17
Ccdc17Q8CE13 Gm27243-201ENSMUST00000183964 521 ntBASIC14.02□□□□□ -0.17
Ccdc17Q8CE13 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC14.02□□□□□ -0.17
Ccdc17Q8CE13 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc17Q8CE13 Gm42550-201ENSMUST00000201553 960 ntBASIC14.02□□□□□ -0.17
Ccdc17Q8CE13 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc17Q8CE13 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc17Q8CE13 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC14.02□□□□□ -0.17
Ccdc17Q8CE13 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc17Q8CE13 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC14.02□□□□□ -0.17
Ccdc17Q8CE13 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc17Q8CE13 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc17Q8CE13 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc17Q8CE13 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc17Q8CE13 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc17Q8CE13 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Ccdc17Q8CE13 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc17Q8CE13 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC14.01□□□□□ -0.17
Ccdc17Q8CE13 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc17Q8CE13 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc17Q8CE13 Gm6159-201ENSMUST00000191249 1724 ntBASIC14.01□□□□□ -0.17
Ccdc17Q8CE13 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc17Q8CE13 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
Ccdc17Q8CE13 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc17Q8CE13 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc17Q8CE13 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc17Q8CE13 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc17Q8CE13 Gm7553-201ENSMUST00000185805 1426 ntBASIC14.01□□□□□ -0.17
Ccdc17Q8CE13 Gm12846-201ENSMUST00000120431 1373 ntBASIC14.01□□□□□ -0.17
Ccdc17Q8CE13 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc17Q8CE13 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc17Q8CE13 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc17Q8CE13 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC14.01□□□□□ -0.17
Ccdc17Q8CE13 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc17Q8CE13 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC14.01□□□□□ -0.17
Ccdc17Q8CE13 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Ccdc17Q8CE13 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc17Q8CE13 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC14.01□□□□□ -0.17
Ccdc17Q8CE13 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc17Q8CE13 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC14.01□□□□□ -0.17
Ccdc17Q8CE13 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Ccdc17Q8CE13 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC14.01□□□□□ -0.17
Ccdc17Q8CE13 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc17Q8CE13 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Ccdc17Q8CE13 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc17Q8CE13 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc17Q8CE13 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Ccdc17Q8CE13 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ccdc17Q8CE13 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc17Q8CE13 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc17Q8CE13 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc17Q8CE13 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc17Q8CE13 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ccdc17Q8CE13 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc17Q8CE13 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc17Q8CE13 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ccdc17Q8CE13 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc17Q8CE13 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc17Q8CE13 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc17Q8CE13 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC14□□□□□ -0.17
Ccdc17Q8CE13 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Ccdc17Q8CE13 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ccdc17Q8CE13 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc17Q8CE13 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ccdc17Q8CE13 Gm18054-201ENSMUST00000207539 555 ntBASIC14□□□□□ -0.17
Ccdc17Q8CE13 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC14□□□□□ -0.17
Ccdc17Q8CE13 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms