Protein–RNA interactions for Protein: Q8CDD9

Lrif1, Ligand-dependent nuclear receptor-interacting factor 1, mousemouse

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrif1Q8CDD9 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC13.38□□□□□ -0.27
Lrif1Q8CDD9 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lrif1Q8CDD9 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Lrif1Q8CDD9 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Lrif1Q8CDD9 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Lrif1Q8CDD9 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Lrif1Q8CDD9 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lrif1Q8CDD9 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC13.38□□□□□ -0.27
Lrif1Q8CDD9 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lrif1Q8CDD9 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC13.38□□□□□ -0.27
Lrif1Q8CDD9 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Lrif1Q8CDD9 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lrif1Q8CDD9 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC13.38□□□□□ -0.27
Lrif1Q8CDD9 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC13.38□□□□□ -0.27
Lrif1Q8CDD9 Gm17435-202ENSMUST00000212699 1998 ntBASIC13.38□□□□□ -0.27
Lrif1Q8CDD9 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Lrif1Q8CDD9 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lrif1Q8CDD9 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lrif1Q8CDD9 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lrif1Q8CDD9 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lrif1Q8CDD9 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC13.37□□□□□ -0.27
Lrif1Q8CDD9 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
Lrif1Q8CDD9 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lrif1Q8CDD9 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lrif1Q8CDD9 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lrif1Q8CDD9 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Lrif1Q8CDD9 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Lrif1Q8CDD9 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lrif1Q8CDD9 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Lrif1Q8CDD9 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC13.37□□□□□ -0.27
Lrif1Q8CDD9 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC13.37□□□□□ -0.27
Lrif1Q8CDD9 Gm25144-201ENSMUST00000179561 110 ntBASIC13.37□□□□□ -0.27
Lrif1Q8CDD9 Gm25352-201ENSMUST00000179815 110 ntBASIC13.37□□□□□ -0.27
Lrif1Q8CDD9 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Lrif1Q8CDD9 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Lrif1Q8CDD9 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Lrif1Q8CDD9 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lrif1Q8CDD9 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lrif1Q8CDD9 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lrif1Q8CDD9 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lrif1Q8CDD9 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC13.37□□□□□ -0.27
Lrif1Q8CDD9 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lrif1Q8CDD9 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lrif1Q8CDD9 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Lrif1Q8CDD9 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lrif1Q8CDD9 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lrif1Q8CDD9 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lrif1Q8CDD9 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lrif1Q8CDD9 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Lrif1Q8CDD9 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Lrif1Q8CDD9 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Lrif1Q8CDD9 AC159621.2-201ENSMUST00000223519 1326 ntBASIC13.37□□□□□ -0.27
Lrif1Q8CDD9 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lrif1Q8CDD9 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lrif1Q8CDD9 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lrif1Q8CDD9 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lrif1Q8CDD9 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC13.36□□□□□ -0.27
Lrif1Q8CDD9 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Lrif1Q8CDD9 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Lrif1Q8CDD9 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lrif1Q8CDD9 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lrif1Q8CDD9 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lrif1Q8CDD9 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lrif1Q8CDD9 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lrif1Q8CDD9 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Lrif1Q8CDD9 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Lrif1Q8CDD9 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lrif1Q8CDD9 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC13.36□□□□□ -0.27
Lrif1Q8CDD9 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lrif1Q8CDD9 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lrif1Q8CDD9 Gm8337-201ENSMUST00000187358 1938 ntBASIC13.36□□□□□ -0.27
Lrif1Q8CDD9 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lrif1Q8CDD9 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lrif1Q8CDD9 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lrif1Q8CDD9 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Lrif1Q8CDD9 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lrif1Q8CDD9 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lrif1Q8CDD9 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Lrif1Q8CDD9 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Lrif1Q8CDD9 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC13.36□□□□□ -0.27
Lrif1Q8CDD9 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lrif1Q8CDD9 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC13.36□□□□□ -0.27
Lrif1Q8CDD9 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Lrif1Q8CDD9 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lrif1Q8CDD9 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lrif1Q8CDD9 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Lrif1Q8CDD9 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Lrif1Q8CDD9 Pck2-205ENSMUST00000226352 2784 ntBASIC13.35□□□□□ -0.27
Lrif1Q8CDD9 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Lrif1Q8CDD9 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Lrif1Q8CDD9 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Lrif1Q8CDD9 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Lrif1Q8CDD9 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Lrif1Q8CDD9 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC13.35□□□□□ -0.27
Lrif1Q8CDD9 Gm6415-201ENSMUST00000118488 348 ntBASIC13.35□□□□□ -0.27
Lrif1Q8CDD9 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Lrif1Q8CDD9 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC13.35□□□□□ -0.27
Lrif1Q8CDD9 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Lrif1Q8CDD9 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC13.35□□□□□ -0.27
Lrif1Q8CDD9 AC139350.3-201ENSMUST00000226151 420 ntBASIC13.35□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 65.8 ms