Protein–RNA interactions for Protein: Q8CCS6

Pabpn1, Polyadenylate-binding protein 2, mousemouse

Known RBP Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pabpn1Q8CCS6 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Pabpn1Q8CCS6 Gm35713-201ENSMUST00000210516 199 ntBASIC20.43■□□□□ 0.86
Pabpn1Q8CCS6 Gm13271-201ENSMUST00000094992 549 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Pabpn1Q8CCS6 Gm5544-201ENSMUST00000098828 891 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Pabpn1Q8CCS6 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
Pabpn1Q8CCS6 Gm13384-201ENSMUST00000117166 1344 ntBASIC20.43■□□□□ 0.86
Pabpn1Q8CCS6 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Pabpn1Q8CCS6 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pabpn1Q8CCS6 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Pabpn1Q8CCS6 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pabpn1Q8CCS6 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pabpn1Q8CCS6 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Pabpn1Q8CCS6 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pabpn1Q8CCS6 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pabpn1Q8CCS6 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pabpn1Q8CCS6 Gm13182-201ENSMUST00000122241 312 ntBASIC20.42■□□□□ 0.86
Pabpn1Q8CCS6 4930502E09Rik-201ENSMUST00000126016 755 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Pabpn1Q8CCS6 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC20.42■□□□□ 0.86
Pabpn1Q8CCS6 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Pabpn1Q8CCS6 Mir1956-201ENSMUST00000157748 65 ntBASIC20.42■□□□□ 0.86
Pabpn1Q8CCS6 Gm25881-201ENSMUST00000157783 103 ntBASIC20.42■□□□□ 0.86
Pabpn1Q8CCS6 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Pabpn1Q8CCS6 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC20.42■□□□□ 0.86
Pabpn1Q8CCS6 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Pabpn1Q8CCS6 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC20.42■□□□□ 0.86
Pabpn1Q8CCS6 AC133602.1-201ENSMUST00000227510 509 ntBASIC20.42■□□□□ 0.86
Pabpn1Q8CCS6 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Pabpn1Q8CCS6 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
Pabpn1Q8CCS6 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pabpn1Q8CCS6 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Pabpn1Q8CCS6 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Pabpn1Q8CCS6 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Pabpn1Q8CCS6 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Pabpn1Q8CCS6 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pabpn1Q8CCS6 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Pabpn1Q8CCS6 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pabpn1Q8CCS6 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pabpn1Q8CCS6 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pabpn1Q8CCS6 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Pabpn1Q8CCS6 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Pabpn1Q8CCS6 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pabpn1Q8CCS6 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Pabpn1Q8CCS6 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pabpn1Q8CCS6 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC20.41■□□□□ 0.86
Pabpn1Q8CCS6 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Pabpn1Q8CCS6 Gm17831-201ENSMUST00000205579 900 ntBASIC20.41■□□□□ 0.86
Pabpn1Q8CCS6 Gm6905-201ENSMUST00000205729 511 ntBASIC20.41■□□□□ 0.86
Pabpn1Q8CCS6 Gm44759-201ENSMUST00000206057 430 ntTSL 3 BASIC20.41■□□□□ 0.86
Pabpn1Q8CCS6 AC167013.1-201ENSMUST00000228592 202 ntBASIC20.41■□□□□ 0.86
Pabpn1Q8CCS6 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pabpn1Q8CCS6 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Pabpn1Q8CCS6 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Pabpn1Q8CCS6 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pabpn1Q8CCS6 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pabpn1Q8CCS6 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pabpn1Q8CCS6 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pabpn1Q8CCS6 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pabpn1Q8CCS6 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Pabpn1Q8CCS6 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pabpn1Q8CCS6 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pabpn1Q8CCS6 Gm45242-201ENSMUST00000210666 2129 ntBASIC20.41■□□□□ 0.86
Pabpn1Q8CCS6 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pabpn1Q8CCS6 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Pabpn1Q8CCS6 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pabpn1Q8CCS6 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pabpn1Q8CCS6 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pabpn1Q8CCS6 Gm13812-201ENSMUST00000118061 1347 ntBASIC20.4■□□□□ 0.86
Pabpn1Q8CCS6 Gm13549-201ENSMUST00000118339 796 ntBASIC20.4■□□□□ 0.86
Pabpn1Q8CCS6 Gm13810-201ENSMUST00000118584 1347 ntBASIC20.4■□□□□ 0.86
Pabpn1Q8CCS6 Gm5257-201ENSMUST00000121823 790 ntBASIC20.4■□□□□ 0.86
Pabpn1Q8CCS6 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Pabpn1Q8CCS6 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pabpn1Q8CCS6 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pabpn1Q8CCS6 Gm23771-201ENSMUST00000178702 110 ntBASIC20.4■□□□□ 0.86
Pabpn1Q8CCS6 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Pabpn1Q8CCS6 Gm42682-201ENSMUST00000198349 1265 ntBASIC20.4■□□□□ 0.86
Pabpn1Q8CCS6 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pabpn1Q8CCS6 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC20.4■□□□□ 0.86
Pabpn1Q8CCS6 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pabpn1Q8CCS6 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pabpn1Q8CCS6 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pabpn1Q8CCS6 Spink2-201ENSMUST00000065216 631 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pabpn1Q8CCS6 Gm19680-201ENSMUST00000095050 1513 ntBASIC20.4■□□□□ 0.86
Pabpn1Q8CCS6 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pabpn1Q8CCS6 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pabpn1Q8CCS6 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC20.39■□□□□ 0.86
Pabpn1Q8CCS6 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Pabpn1Q8CCS6 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Pabpn1Q8CCS6 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Pabpn1Q8CCS6 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC20.39■□□□□ 0.85
Pabpn1Q8CCS6 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC20.39■□□□□ 0.85
Pabpn1Q8CCS6 Surf6-202ENSMUST00000114043 894 ntTSL 5 BASIC20.39■□□□□ 0.85
Pabpn1Q8CCS6 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC20.39■□□□□ 0.85
Pabpn1Q8CCS6 Rpain-201ENSMUST00000018593 1100 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Pabpn1Q8CCS6 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC20.39■□□□□ 0.85
Pabpn1Q8CCS6 Znhit6-206ENSMUST00000199033 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Pabpn1Q8CCS6 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC20.39■□□□□ 0.85
Pabpn1Q8CCS6 Gm18463-201ENSMUST00000207258 474 ntBASIC20.39■□□□□ 0.85
Pabpn1Q8CCS6 Gm18204-201ENSMUST00000209835 793 ntBASIC20.39■□□□□ 0.85
Pabpn1Q8CCS6 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms