Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ccdc60Q8C4J0 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ccdc60Q8C4J0 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ccdc60Q8C4J0 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Ccdc60Q8C4J0 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ccdc60Q8C4J0 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC17.23■□□□□ 0.35
Ccdc60Q8C4J0 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC17.23■□□□□ 0.35
Ccdc60Q8C4J0 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ccdc60Q8C4J0 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ccdc60Q8C4J0 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Ccdc60Q8C4J0 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Ccdc60Q8C4J0 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Ccdc60Q8C4J0 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
Ccdc60Q8C4J0 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ccdc60Q8C4J0 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Ccdc60Q8C4J0 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ccdc60Q8C4J0 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ccdc60Q8C4J0 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ccdc60Q8C4J0 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ccdc60Q8C4J0 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ccdc60Q8C4J0 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ccdc60Q8C4J0 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ccdc60Q8C4J0 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Ccdc60Q8C4J0 Gm12138-201ENSMUST00000122180 951 ntBASIC17.22■□□□□ 0.35
Ccdc60Q8C4J0 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC17.22■□□□□ 0.35
Ccdc60Q8C4J0 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ccdc60Q8C4J0 Gm38223-201ENSMUST00000194484 695 ntBASIC17.22■□□□□ 0.35
Ccdc60Q8C4J0 Gm45384-201ENSMUST00000210451 277 ntBASIC17.22■□□□□ 0.35
Ccdc60Q8C4J0 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ccdc60Q8C4J0 AC155252.1-201ENSMUST00000226462 1208 ntBASIC17.22■□□□□ 0.35
Ccdc60Q8C4J0 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ccdc60Q8C4J0 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
Ccdc60Q8C4J0 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ccdc60Q8C4J0 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ccdc60Q8C4J0 Gm13730-201ENSMUST00000121036 1462 ntBASIC17.22■□□□□ 0.35
Ccdc60Q8C4J0 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC17.22■□□□□ 0.35
Ccdc60Q8C4J0 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ccdc60Q8C4J0 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Ccdc60Q8C4J0 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ccdc60Q8C4J0 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Ccdc60Q8C4J0 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC17.21■□□□□ 0.35
Ccdc60Q8C4J0 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ccdc60Q8C4J0 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC17.21■□□□□ 0.35
Ccdc60Q8C4J0 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ccdc60Q8C4J0 Ksr1-207ENSMUST00000226282 5260 ntBASIC17.21■□□□□ 0.35
Ccdc60Q8C4J0 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ccdc60Q8C4J0 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ccdc60Q8C4J0 Gm15429-201ENSMUST00000151268 798 ntBASIC17.21■□□□□ 0.35
Ccdc60Q8C4J0 Gm38144-201ENSMUST00000192790 465 ntBASIC17.21■□□□□ 0.35
Ccdc60Q8C4J0 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Ccdc60Q8C4J0 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
Ccdc60Q8C4J0 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC17.21■□□□□ 0.35
Ccdc60Q8C4J0 AC154595.3-201ENSMUST00000224579 384 ntBASIC17.21■□□□□ 0.35
Ccdc60Q8C4J0 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ccdc60Q8C4J0 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ccdc60Q8C4J0 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ccdc60Q8C4J0 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ccdc60Q8C4J0 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Ccdc60Q8C4J0 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC17.21■□□□□ 0.34
Ccdc60Q8C4J0 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ccdc60Q8C4J0 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ccdc60Q8C4J0 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Ccdc60Q8C4J0 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ccdc60Q8C4J0 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ccdc60Q8C4J0 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC17.2■□□□□ 0.34
Ccdc60Q8C4J0 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Ccdc60Q8C4J0 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Ccdc60Q8C4J0 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Ccdc60Q8C4J0 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ccdc60Q8C4J0 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ccdc60Q8C4J0 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ccdc60Q8C4J0 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC17.2■□□□□ 0.34
Ccdc60Q8C4J0 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Ccdc60Q8C4J0 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Ccdc60Q8C4J0 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Ccdc60Q8C4J0 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC17.2■□□□□ 0.34
Ccdc60Q8C4J0 Gm9794-201ENSMUST00000202370 423 ntBASIC17.2■□□□□ 0.34
Ccdc60Q8C4J0 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC17.2■□□□□ 0.34
Ccdc60Q8C4J0 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC17.2■□□□□ 0.34
Ccdc60Q8C4J0 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ccdc60Q8C4J0 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ccdc60Q8C4J0 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ccdc60Q8C4J0 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ccdc60Q8C4J0 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Ccdc60Q8C4J0 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ccdc60Q8C4J0 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Ccdc60Q8C4J0 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ccdc60Q8C4J0 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ccdc60Q8C4J0 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ccdc60Q8C4J0 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Ccdc60Q8C4J0 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Ccdc60Q8C4J0 Tmed9-203ENSMUST00000224741 1450 ntBASIC17.19■□□□□ 0.34
Ccdc60Q8C4J0 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ccdc60Q8C4J0 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ccdc60Q8C4J0 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ccdc60Q8C4J0 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ccdc60Q8C4J0 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ccdc60Q8C4J0 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ccdc60Q8C4J0 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
Ccdc60Q8C4J0 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms