Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Samm50Q8BGH2 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Samm50Q8BGH2 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Samm50Q8BGH2 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Samm50Q8BGH2 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Samm50Q8BGH2 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Samm50Q8BGH2 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Samm50Q8BGH2 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Samm50Q8BGH2 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Samm50Q8BGH2 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Samm50Q8BGH2 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Samm50Q8BGH2 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Samm50Q8BGH2 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Samm50Q8BGH2 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Samm50Q8BGH2 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Samm50Q8BGH2 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Samm50Q8BGH2 Gm24694-201ENSMUST00000180054 110 ntBASIC15.85■□□□□ 0.13
Samm50Q8BGH2 Gm9522-201ENSMUST00000182394 926 ntBASIC15.85■□□□□ 0.13
Samm50Q8BGH2 Gm27663-201ENSMUST00000184839 110 ntBASIC15.85■□□□□ 0.13
Samm50Q8BGH2 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Samm50Q8BGH2 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC15.85■□□□□ 0.13
Samm50Q8BGH2 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Samm50Q8BGH2 Gm45638-201ENSMUST00000211507 2878 ntBASIC15.85■□□□□ 0.13
Samm50Q8BGH2 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Samm50Q8BGH2 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Samm50Q8BGH2 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Samm50Q8BGH2 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Samm50Q8BGH2 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Samm50Q8BGH2 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Samm50Q8BGH2 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Samm50Q8BGH2 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Samm50Q8BGH2 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC15.85■□□□□ 0.13
Samm50Q8BGH2 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Samm50Q8BGH2 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Samm50Q8BGH2 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Samm50Q8BGH2 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC15.84■□□□□ 0.13
Samm50Q8BGH2 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Samm50Q8BGH2 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC15.84■□□□□ 0.13
Samm50Q8BGH2 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Samm50Q8BGH2 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Samm50Q8BGH2 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Samm50Q8BGH2 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC15.84■□□□□ 0.13
Samm50Q8BGH2 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Samm50Q8BGH2 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Samm50Q8BGH2 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Samm50Q8BGH2 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC15.84■□□□□ 0.13
Samm50Q8BGH2 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Samm50Q8BGH2 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Samm50Q8BGH2 AC139350.3-201ENSMUST00000226151 420 ntBASIC15.84■□□□□ 0.13
Samm50Q8BGH2 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Samm50Q8BGH2 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Samm50Q8BGH2 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Samm50Q8BGH2 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Samm50Q8BGH2 Gm6263-201ENSMUST00000120029 1342 ntBASIC15.84■□□□□ 0.13
Samm50Q8BGH2 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Samm50Q8BGH2 Zkscan14-203ENSMUST00000198959 2243 ntBASIC15.84■□□□□ 0.13
Samm50Q8BGH2 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Samm50Q8BGH2 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Samm50Q8BGH2 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Samm50Q8BGH2 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC15.84■□□□□ 0.13
Samm50Q8BGH2 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Samm50Q8BGH2 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Samm50Q8BGH2 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC15.84■□□□□ 0.13
Samm50Q8BGH2 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Samm50Q8BGH2 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Samm50Q8BGH2 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Samm50Q8BGH2 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Samm50Q8BGH2 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.13
Samm50Q8BGH2 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Samm50Q8BGH2 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Samm50Q8BGH2 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Samm50Q8BGH2 Gm45242-201ENSMUST00000210666 2129 ntBASIC15.83■□□□□ 0.13
Samm50Q8BGH2 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Samm50Q8BGH2 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC15.83■□□□□ 0.13
Samm50Q8BGH2 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Samm50Q8BGH2 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Samm50Q8BGH2 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Samm50Q8BGH2 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Samm50Q8BGH2 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Samm50Q8BGH2 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Samm50Q8BGH2 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Samm50Q8BGH2 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Samm50Q8BGH2 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Samm50Q8BGH2 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Samm50Q8BGH2 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Samm50Q8BGH2 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Samm50Q8BGH2 Gm15321-201ENSMUST00000121290 288 ntBASIC15.83■□□□□ 0.12
Samm50Q8BGH2 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC15.83■□□□□ 0.12
Samm50Q8BGH2 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC15.83■□□□□ 0.12
Samm50Q8BGH2 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC15.83■□□□□ 0.12
Samm50Q8BGH2 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Samm50Q8BGH2 AC153872.1-201ENSMUST00000199539 128 ntBASIC15.83■□□□□ 0.12
Samm50Q8BGH2 AC154846.1-201ENSMUST00000226278 862 ntBASIC15.83■□□□□ 0.12
Samm50Q8BGH2 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Samm50Q8BGH2 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Samm50Q8BGH2 AC154725.1-201ENSMUST00000224826 1961 ntBASIC15.83■□□□□ 0.12
Samm50Q8BGH2 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Samm50Q8BGH2 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Samm50Q8BGH2 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Samm50Q8BGH2 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms