Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdh8Q7TSK3 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC13.34□□□□□ -0.27
Pcdh8Q7TSK3 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdh8Q7TSK3 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdh8Q7TSK3 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Pcdh8Q7TSK3 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC13.33□□□□□ -0.27
Pcdh8Q7TSK3 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdh8Q7TSK3 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdh8Q7TSK3 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdh8Q7TSK3 Gm38102-201ENSMUST00000192791 1935 ntBASIC13.33□□□□□ -0.28
Pcdh8Q7TSK3 AC168058.1-201ENSMUST00000219521 2282 ntBASIC13.33□□□□□ -0.28
Pcdh8Q7TSK3 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
Pcdh8Q7TSK3 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Pcdh8Q7TSK3 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdh8Q7TSK3 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdh8Q7TSK3 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC13.33□□□□□ -0.28
Pcdh8Q7TSK3 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdh8Q7TSK3 Gm11814-201ENSMUST00000119515 929 ntBASIC13.33□□□□□ -0.28
Pcdh8Q7TSK3 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC13.33□□□□□ -0.28
Pcdh8Q7TSK3 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdh8Q7TSK3 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdh8Q7TSK3 Gm27847-201ENSMUST00000183711 107 ntBASIC13.33□□□□□ -0.28
Pcdh8Q7TSK3 Gm27375-201ENSMUST00000183799 107 ntBASIC13.33□□□□□ -0.28
Pcdh8Q7TSK3 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
Pcdh8Q7TSK3 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdh8Q7TSK3 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdh8Q7TSK3 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdh8Q7TSK3 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdh8Q7TSK3 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdh8Q7TSK3 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdh8Q7TSK3 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdh8Q7TSK3 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdh8Q7TSK3 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdh8Q7TSK3 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdh8Q7TSK3 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC13.33□□□□□ -0.28
Pcdh8Q7TSK3 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdh8Q7TSK3 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC13.33□□□□□ -0.28
Pcdh8Q7TSK3 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdh8Q7TSK3 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdh8Q7TSK3 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC13.32□□□□□ -0.28
Pcdh8Q7TSK3 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdh8Q7TSK3 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC13.32□□□□□ -0.28
Pcdh8Q7TSK3 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdh8Q7TSK3 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdh8Q7TSK3 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdh8Q7TSK3 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdh8Q7TSK3 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdh8Q7TSK3 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdh8Q7TSK3 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdh8Q7TSK3 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdh8Q7TSK3 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdh8Q7TSK3 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdh8Q7TSK3 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdh8Q7TSK3 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdh8Q7TSK3 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC13.32□□□□□ -0.28
Pcdh8Q7TSK3 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC13.32□□□□□ -0.28
Pcdh8Q7TSK3 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Pcdh8Q7TSK3 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdh8Q7TSK3 Gm38230-201ENSMUST00000193572 1159 ntBASIC13.32□□□□□ -0.28
Pcdh8Q7TSK3 Gm44397-201ENSMUST00000195950 113 ntBASIC13.32□□□□□ -0.28
Pcdh8Q7TSK3 Gm5161-201ENSMUST00000075243 853 ntBASIC13.32□□□□□ -0.28
Pcdh8Q7TSK3 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdh8Q7TSK3 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdh8Q7TSK3 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdh8Q7TSK3 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdh8Q7TSK3 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdh8Q7TSK3 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdh8Q7TSK3 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdh8Q7TSK3 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC13.32□□□□□ -0.28
Pcdh8Q7TSK3 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC13.32□□□□□ -0.28
Pcdh8Q7TSK3 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC13.32□□□□□ -0.28
Pcdh8Q7TSK3 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC13.32□□□□□ -0.28
Pcdh8Q7TSK3 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdh8Q7TSK3 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdh8Q7TSK3 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdh8Q7TSK3 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdh8Q7TSK3 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdh8Q7TSK3 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC13.31□□□□□ -0.28
Pcdh8Q7TSK3 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdh8Q7TSK3 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdh8Q7TSK3 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Pcdh8Q7TSK3 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdh8Q7TSK3 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdh8Q7TSK3 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdh8Q7TSK3 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdh8Q7TSK3 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC13.31□□□□□ -0.28
Pcdh8Q7TSK3 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdh8Q7TSK3 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdh8Q7TSK3 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Pcdh8Q7TSK3 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Pcdh8Q7TSK3 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdh8Q7TSK3 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Pcdh8Q7TSK3 Gm8652-201ENSMUST00000181363 964 ntBASIC13.31□□□□□ -0.28
Pcdh8Q7TSK3 AY702102-202ENSMUST00000194651 1173 ntBASIC13.31□□□□□ -0.28
Pcdh8Q7TSK3 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Pcdh8Q7TSK3 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC13.31□□□□□ -0.28
Pcdh8Q7TSK3 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdh8Q7TSK3 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC13.31□□□□□ -0.28
Pcdh8Q7TSK3 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdh8Q7TSK3 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms