Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Scaf4Q6PFF0 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Scaf4Q6PFF0 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Scaf4Q6PFF0 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scaf4Q6PFF0 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Scaf4Q6PFF0 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC13.32□□□□□ -0.28
Scaf4Q6PFF0 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC13.32□□□□□ -0.28
Scaf4Q6PFF0 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scaf4Q6PFF0 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scaf4Q6PFF0 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Scaf4Q6PFF0 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scaf4Q6PFF0 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC13.32□□□□□ -0.28
Scaf4Q6PFF0 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scaf4Q6PFF0 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Scaf4Q6PFF0 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scaf4Q6PFF0 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Scaf4Q6PFF0 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scaf4Q6PFF0 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scaf4Q6PFF0 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scaf4Q6PFF0 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scaf4Q6PFF0 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Scaf4Q6PFF0 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
Scaf4Q6PFF0 Gm15460-201ENSMUST00000118147 391 ntBASIC13.32□□□□□ -0.28
Scaf4Q6PFF0 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scaf4Q6PFF0 Gm13385-201ENSMUST00000121089 220 ntBASIC13.32□□□□□ -0.28
Scaf4Q6PFF0 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scaf4Q6PFF0 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scaf4Q6PFF0 Gm27494-201ENSMUST00000184735 189 ntBASIC13.32□□□□□ -0.28
Scaf4Q6PFF0 Gm21470-201ENSMUST00000187680 696 ntBASIC13.32□□□□□ -0.28
Scaf4Q6PFF0 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC13.32□□□□□ -0.28
Scaf4Q6PFF0 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Scaf4Q6PFF0 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC13.32□□□□□ -0.28
Scaf4Q6PFF0 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scaf4Q6PFF0 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scaf4Q6PFF0 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Scaf4Q6PFF0 Gm44401-201ENSMUST00000204462 2375 ntBASIC13.32□□□□□ -0.28
Scaf4Q6PFF0 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scaf4Q6PFF0 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scaf4Q6PFF0 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scaf4Q6PFF0 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scaf4Q6PFF0 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scaf4Q6PFF0 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scaf4Q6PFF0 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scaf4Q6PFF0 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Scaf4Q6PFF0 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scaf4Q6PFF0 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Scaf4Q6PFF0 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scaf4Q6PFF0 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Scaf4Q6PFF0 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scaf4Q6PFF0 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Scaf4Q6PFF0 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Scaf4Q6PFF0 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scaf4Q6PFF0 Gm27196-201ENSMUST00000184787 2582 ntBASIC13.31□□□□□ -0.28
Scaf4Q6PFF0 Gm43273-201ENSMUST00000199649 2594 ntBASIC13.31□□□□□ -0.28
Scaf4Q6PFF0 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC13.31□□□□□ -0.28
Scaf4Q6PFF0 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Scaf4Q6PFF0 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scaf4Q6PFF0 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Scaf4Q6PFF0 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Scaf4Q6PFF0 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scaf4Q6PFF0 AC151895.1-201ENSMUST00000219025 1742 ntBASIC13.31□□□□□ -0.28
Scaf4Q6PFF0 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scaf4Q6PFF0 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scaf4Q6PFF0 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Scaf4Q6PFF0 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scaf4Q6PFF0 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Scaf4Q6PFF0 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Scaf4Q6PFF0 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC13.31□□□□□ -0.28
Scaf4Q6PFF0 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Scaf4Q6PFF0 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Scaf4Q6PFF0 Gm27741-201ENSMUST00000185060 237 ntBASIC13.31□□□□□ -0.28
Scaf4Q6PFF0 AC153872.1-201ENSMUST00000199539 128 ntBASIC13.31□□□□□ -0.28
Scaf4Q6PFF0 Gm3695-201ENSMUST00000087222 1009 ntBASIC13.31□□□□□ -0.28
Scaf4Q6PFF0 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Scaf4Q6PFF0 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Scaf4Q6PFF0 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Scaf4Q6PFF0 Gm44851-201ENSMUST00000205735 2309 ntBASIC13.31□□□□□ -0.28
Scaf4Q6PFF0 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scaf4Q6PFF0 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scaf4Q6PFF0 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scaf4Q6PFF0 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scaf4Q6PFF0 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
Scaf4Q6PFF0 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scaf4Q6PFF0 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scaf4Q6PFF0 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scaf4Q6PFF0 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Scaf4Q6PFF0 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC13.31□□□□□ -0.28
Scaf4Q6PFF0 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scaf4Q6PFF0 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Scaf4Q6PFF0 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Scaf4Q6PFF0 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC13.3□□□□□ -0.28
Scaf4Q6PFF0 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Scaf4Q6PFF0 Gm45643-201ENSMUST00000211364 1484 ntBASIC13.3□□□□□ -0.28
Scaf4Q6PFF0 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Scaf4Q6PFF0 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Scaf4Q6PFF0 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Scaf4Q6PFF0 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Scaf4Q6PFF0 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Scaf4Q6PFF0 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Scaf4Q6PFF0 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms