Protein–RNA interactions for Protein: Q66PY1

Scube3, Signal peptide, CUB and EGF-like domain-containing protein 3, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scube3Q66PY1 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Scube3Q66PY1 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Scube3Q66PY1 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scube3Q66PY1 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC14.25□□□□□ -0.13
Scube3Q66PY1 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scube3Q66PY1 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scube3Q66PY1 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scube3Q66PY1 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC14.25□□□□□ -0.13
Scube3Q66PY1 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scube3Q66PY1 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Scube3Q66PY1 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scube3Q66PY1 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scube3Q66PY1 AC155252.1-201ENSMUST00000226462 1208 ntBASIC14.25□□□□□ -0.13
Scube3Q66PY1 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scube3Q66PY1 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scube3Q66PY1 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Scube3Q66PY1 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scube3Q66PY1 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scube3Q66PY1 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scube3Q66PY1 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scube3Q66PY1 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC14.25□□□□□ -0.13
Scube3Q66PY1 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
Scube3Q66PY1 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scube3Q66PY1 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Scube3Q66PY1 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scube3Q66PY1 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scube3Q66PY1 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scube3Q66PY1 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Scube3Q66PY1 Ncmap-201ENSMUST00000064481 1448 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
Scube3Q66PY1 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Scube3Q66PY1 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Scube3Q66PY1 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Scube3Q66PY1 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Scube3Q66PY1 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Scube3Q66PY1 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Scube3Q66PY1 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Scube3Q66PY1 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
Scube3Q66PY1 Gm12537-201ENSMUST00000119266 1002 ntBASIC14.24□□□□□ -0.13
Scube3Q66PY1 Gm12070-201ENSMUST00000119551 1002 ntBASIC14.24□□□□□ -0.13
Scube3Q66PY1 Gm12671-201ENSMUST00000119978 1002 ntBASIC14.24□□□□□ -0.13
Scube3Q66PY1 Gm13292-201ENSMUST00000120014 1000 ntBASIC14.24□□□□□ -0.13
Scube3Q66PY1 Gm12403-201ENSMUST00000121384 959 ntBASIC14.24□□□□□ -0.13
Scube3Q66PY1 Nr6a1os-201ENSMUST00000129089 645 ntTSL 2 BASIC14.24□□□□□ -0.13
Scube3Q66PY1 4933405E24Rik-201ENSMUST00000131019 1078 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Scube3Q66PY1 Gm10359-201ENSMUST00000180167 1002 ntBASIC14.24□□□□□ -0.13
Scube3Q66PY1 Gm12033-201ENSMUST00000180654 1002 ntBASIC14.24□□□□□ -0.13
Scube3Q66PY1 Gm5559-201ENSMUST00000180755 1002 ntBASIC14.24□□□□□ -0.13
Scube3Q66PY1 Gm4335-201ENSMUST00000182581 1004 ntBASIC14.24□□□□□ -0.13
Scube3Q66PY1 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Scube3Q66PY1 Gm43692-201ENSMUST00000198236 1062 ntBASIC14.24□□□□□ -0.13
Scube3Q66PY1 Gm42550-201ENSMUST00000201553 960 ntBASIC14.24□□□□□ -0.13
Scube3Q66PY1 Gm45059-201ENSMUST00000205558 1077 ntBASIC14.24□□□□□ -0.13
Scube3Q66PY1 AC132467.2-202ENSMUST00000227726 559 ntBASIC14.24□□□□□ -0.13
Scube3Q66PY1 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Scube3Q66PY1 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Scube3Q66PY1 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Scube3Q66PY1 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Scube3Q66PY1 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Scube3Q66PY1 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Scube3Q66PY1 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Scube3Q66PY1 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Scube3Q66PY1 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Scube3Q66PY1 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Scube3Q66PY1 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Scube3Q66PY1 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
Scube3Q66PY1 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Scube3Q66PY1 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Scube3Q66PY1 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Scube3Q66PY1 Gm30238-201ENSMUST00000195528 2603 ntBASIC14.24□□□□□ -0.13
Scube3Q66PY1 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Scube3Q66PY1 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Scube3Q66PY1 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Scube3Q66PY1 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC14.23□□□□□ -0.13
Scube3Q66PY1 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
Scube3Q66PY1 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Scube3Q66PY1 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Scube3Q66PY1 EU599041-202ENSMUST00000205291 1386 ntTSL 5 BASIC14.23□□□□□ -0.13
Scube3Q66PY1 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Scube3Q66PY1 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Scube3Q66PY1 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Scube3Q66PY1 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Scube3Q66PY1 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Scube3Q66PY1 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Scube3Q66PY1 Gm45657-201ENSMUST00000211318 1349 ntBASIC14.23□□□□□ -0.13
Scube3Q66PY1 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Scube3Q66PY1 AC139350.1-201ENSMUST00000227064 1594 ntBASIC14.23□□□□□ -0.13
Scube3Q66PY1 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Scube3Q66PY1 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC14.23□□□□□ -0.13
Scube3Q66PY1 Gm11077-201ENSMUST00000111844 84 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Scube3Q66PY1 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Scube3Q66PY1 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Scube3Q66PY1 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC14.23□□□□□ -0.13
Scube3Q66PY1 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC14.23□□□□□ -0.13
Scube3Q66PY1 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Scube3Q66PY1 Gm15429-201ENSMUST00000151268 798 ntBASIC14.23□□□□□ -0.13
Scube3Q66PY1 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Scube3Q66PY1 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Scube3Q66PY1 Gm38223-201ENSMUST00000194484 695 ntBASIC14.23□□□□□ -0.13
Scube3Q66PY1 Gm44593-201ENSMUST00000208372 1249 ntTSL 5 BASIC14.23□□□□□ -0.13
Scube3Q66PY1 Gm17870-201ENSMUST00000219489 1174 ntBASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms