Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Gm5277-201ENSMUST00000164923 556 ntBASIC10.09□□□□□ -0.79
Foxc1Q61572 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Foxc1Q61572 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Foxc1Q61572 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC10.09□□□□□ -0.79
Foxc1Q61572 Gm21139-201ENSMUST00000186594 877 ntBASIC10.09□□□□□ -0.79
Foxc1Q61572 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC10.09□□□□□ -0.79
Foxc1Q61572 Ighv1-25-201ENSMUST00000195638 345 ntBASIC10.09□□□□□ -0.79
Foxc1Q61572 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Foxc1Q61572 Gm43058-201ENSMUST00000197645 625 ntBASIC10.09□□□□□ -0.79
Foxc1Q61572 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Foxc1Q61572 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Foxc1Q61572 AC124732.1-201ENSMUST00000221551 910 ntBASIC10.09□□□□□ -0.79
Foxc1Q61572 AC132433.1-201ENSMUST00000221553 1101 ntBASIC10.09□□□□□ -0.79
Foxc1Q61572 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Foxc1Q61572 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Foxc1Q61572 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Foxc1Q61572 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC10.09□□□□□ -0.79
Foxc1Q61572 Olfr765-201ENSMUST00000071559 930 ntAPPRIS P1 BASIC10.09□□□□□ -0.79
Foxc1Q61572 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Foxc1Q61572 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Foxc1Q61572 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Foxc1Q61572 Olfr1275-201ENSMUST00000099620 1020 ntAPPRIS P1 BASIC10.09□□□□□ -0.79
Foxc1Q61572 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Foxc1Q61572 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Foxc1Q61572 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Foxc1Q61572 Gm4081-201ENSMUST00000195287 1838 ntBASIC10.09□□□□□ -0.79
Foxc1Q61572 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Foxc1Q61572 Gm3365-201ENSMUST00000216296 1480 ntBASIC10.09□□□□□ -0.79
Foxc1Q61572 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC10.09□□□□□ -0.79
Foxc1Q61572 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Foxc1Q61572 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Foxc1Q61572 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Foxc1Q61572 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Foxc1Q61572 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Foxc1Q61572 Vrk1-204ENSMUST00000220629 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Foxc1Q61572 AC166491.1-201ENSMUST00000227053 2308 ntBASIC10.08□□□□□ -0.8
Foxc1Q61572 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Foxc1Q61572 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Foxc1Q61572 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Foxc1Q61572 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Foxc1Q61572 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Foxc1Q61572 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Foxc1Q61572 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Foxc1Q61572 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC10.08□□□□□ -0.8
Foxc1Q61572 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Foxc1Q61572 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
Foxc1Q61572 Gm43677-201ENSMUST00000198098 2378 ntBASIC10.08□□□□□ -0.8
Foxc1Q61572 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Foxc1Q61572 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Foxc1Q61572 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Foxc1Q61572 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC10.08□□□□□ -0.8
Foxc1Q61572 Gm45630-201ENSMUST00000210243 1911 ntBASIC10.08□□□□□ -0.8
Foxc1Q61572 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC10.08□□□□□ -0.8
Foxc1Q61572 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
Foxc1Q61572 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
Foxc1Q61572 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Foxc1Q61572 Gm45638-201ENSMUST00000211507 2878 ntBASIC10.08□□□□□ -0.8
Foxc1Q61572 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC10.08□□□□□ -0.8
Foxc1Q61572 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Foxc1Q61572 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC10.08□□□□□ -0.8
Foxc1Q61572 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC10.08□□□□□ -0.8
Foxc1Q61572 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC10.08□□□□□ -0.8
Foxc1Q61572 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Foxc1Q61572 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC10.08□□□□□ -0.8
Foxc1Q61572 C330021F23Rik-204ENSMUST00000151633 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Foxc1Q61572 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC10.08□□□□□ -0.8
Foxc1Q61572 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Foxc1Q61572 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Foxc1Q61572 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
Foxc1Q61572 Gm27838-201ENSMUST00000184829 128 ntBASIC10.08□□□□□ -0.8
Foxc1Q61572 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC10.08□□□□□ -0.8
Foxc1Q61572 Gm38319-201ENSMUST00000194537 1266 ntBASIC10.08□□□□□ -0.8
Foxc1Q61572 Gm21190-202ENSMUST00000196384 1167 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Foxc1Q61572 Ighv8-14-201ENSMUST00000196781 358 ntBASIC10.08□□□□□ -0.8
Foxc1Q61572 Gm21149-201ENSMUST00000197995 1212 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
Foxc1Q61572 Gm44845-201ENSMUST00000208773 335 ntBASIC10.08□□□□□ -0.8
Foxc1Q61572 AC153968.2-201ENSMUST00000215579 1140 ntBASIC10.08□□□□□ -0.8
Foxc1Q61572 AC131690.1-201ENSMUST00000218406 374 ntBASIC10.08□□□□□ -0.8
Foxc1Q61572 AC153512.2-201ENSMUST00000220363 1273 ntTSL 5 BASIC10.08□□□□□ -0.8
Foxc1Q61572 Gm9063-201ENSMUST00000223299 582 ntBASIC10.08□□□□□ -0.8
Foxc1Q61572 AC158388.1-201ENSMUST00000225441 256 ntBASIC10.08□□□□□ -0.8
Foxc1Q61572 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Foxc1Q61572 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Foxc1Q61572 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Foxc1Q61572 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC10.08□□□□□ -0.8
Foxc1Q61572 C330021F23Rik-201ENSMUST00000086479 1111 ntAPPRIS P2 TSL 5 BASIC10.08□□□□□ -0.8
Foxc1Q61572 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Foxc1Q61572 Tas2r121-201ENSMUST00000095395 918 ntAPPRIS P1 BASIC10.08□□□□□ -0.8
Foxc1Q61572 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Foxc1Q61572 Gm42748-201ENSMUST00000199354 2341 ntBASIC10.08□□□□□ -0.8
Foxc1Q61572 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Foxc1Q61572 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
Foxc1Q61572 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Foxc1Q61572 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Foxc1Q61572 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Foxc1Q61572 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC10.08□□□□□ -0.8
Foxc1Q61572 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Foxc1Q61572 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Foxc1Q61572 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Foxc1Q61572 Gm26513-201ENSMUST00000181802 2489 ntBASIC10.08□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms