Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Vps54Q5SPW0 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Vps54Q5SPW0 Gm5303-201ENSMUST00000117943 1252 ntBASIC16.2■□□□□ 0.18
Vps54Q5SPW0 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
Vps54Q5SPW0 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC16.2■□□□□ 0.18
Vps54Q5SPW0 Gm6152-201ENSMUST00000151704 340 ntBASIC16.2■□□□□ 0.18
Vps54Q5SPW0 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC16.2■□□□□ 0.18
Vps54Q5SPW0 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Vps54Q5SPW0 Gm8652-201ENSMUST00000181363 964 ntBASIC16.2■□□□□ 0.18
Vps54Q5SPW0 Gm38671-201ENSMUST00000200573 130 ntBASIC16.2■□□□□ 0.18
Vps54Q5SPW0 Gm8598-201ENSMUST00000221184 836 ntBASIC16.2■□□□□ 0.18
Vps54Q5SPW0 AC110817.1-201ENSMUST00000225706 605 ntBASIC16.2■□□□□ 0.18
Vps54Q5SPW0 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Vps54Q5SPW0 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Vps54Q5SPW0 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Vps54Q5SPW0 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Vps54Q5SPW0 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Vps54Q5SPW0 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Vps54Q5SPW0 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Vps54Q5SPW0 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Vps54Q5SPW0 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Vps54Q5SPW0 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Vps54Q5SPW0 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
Vps54Q5SPW0 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Vps54Q5SPW0 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Vps54Q5SPW0 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Vps54Q5SPW0 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vps54Q5SPW0 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vps54Q5SPW0 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Vps54Q5SPW0 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vps54Q5SPW0 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Vps54Q5SPW0 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Vps54Q5SPW0 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC16.19■□□□□ 0.18
Vps54Q5SPW0 Gm5687-201ENSMUST00000118252 640 ntBASIC16.19■□□□□ 0.18
Vps54Q5SPW0 Gm13612-201ENSMUST00000119276 390 ntBASIC16.19■□□□□ 0.18
Vps54Q5SPW0 Gm11400-201ENSMUST00000120853 1214 ntBASIC16.19■□□□□ 0.18
Vps54Q5SPW0 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC16.19■□□□□ 0.18
Vps54Q5SPW0 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC16.19■□□□□ 0.18
Vps54Q5SPW0 Gm18473-201ENSMUST00000220543 868 ntBASIC16.19■□□□□ 0.18
Vps54Q5SPW0 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vps54Q5SPW0 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Vps54Q5SPW0 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
Vps54Q5SPW0 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Vps54Q5SPW0 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Vps54Q5SPW0 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Vps54Q5SPW0 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vps54Q5SPW0 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vps54Q5SPW0 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Vps54Q5SPW0 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vps54Q5SPW0 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vps54Q5SPW0 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC16.18■□□□□ 0.18
Vps54Q5SPW0 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vps54Q5SPW0 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vps54Q5SPW0 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Vps54Q5SPW0 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Vps54Q5SPW0 Gm42769-201ENSMUST00000198576 1659 ntBASIC16.18■□□□□ 0.18
Vps54Q5SPW0 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Vps54Q5SPW0 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Vps54Q5SPW0 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC16.18■□□□□ 0.18
Vps54Q5SPW0 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Vps54Q5SPW0 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC16.18■□□□□ 0.18
Vps54Q5SPW0 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC16.18■□□□□ 0.18
Vps54Q5SPW0 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC16.18■□□□□ 0.18
Vps54Q5SPW0 Gm42929-201ENSMUST00000198374 1286 ntBASIC16.18■□□□□ 0.18
Vps54Q5SPW0 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC16.18■□□□□ 0.18
Vps54Q5SPW0 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Vps54Q5SPW0 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vps54Q5SPW0 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vps54Q5SPW0 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vps54Q5SPW0 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vps54Q5SPW0 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vps54Q5SPW0 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vps54Q5SPW0 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC16.18■□□□□ 0.18
Vps54Q5SPW0 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vps54Q5SPW0 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vps54Q5SPW0 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vps54Q5SPW0 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC16.18■□□□□ 0.18
Vps54Q5SPW0 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vps54Q5SPW0 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC16.18■□□□□ 0.18
Vps54Q5SPW0 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Vps54Q5SPW0 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vps54Q5SPW0 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Vps54Q5SPW0 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Vps54Q5SPW0 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Vps54Q5SPW0 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC16.17■□□□□ 0.18
Vps54Q5SPW0 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Vps54Q5SPW0 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Vps54Q5SPW0 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Vps54Q5SPW0 AC154725.1-201ENSMUST00000224826 1961 ntBASIC16.17■□□□□ 0.18
Vps54Q5SPW0 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Vps54Q5SPW0 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC16.17■□□□□ 0.18
Vps54Q5SPW0 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC16.17■□□□□ 0.18
Vps54Q5SPW0 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC16.17■□□□□ 0.18
Vps54Q5SPW0 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
Vps54Q5SPW0 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC16.17■□□□□ 0.18
Vps54Q5SPW0 Gm18187-201ENSMUST00000196476 984 ntBASIC16.17■□□□□ 0.18
Vps54Q5SPW0 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Vps54Q5SPW0 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Vps54Q5SPW0 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Vps54Q5SPW0 Itm2b-204ENSMUST00000228637 783 ntBASIC16.17■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms