Protein–RNA interactions for Protein: Q3U898

Cops9, COP9 signalosome complex subunit 9, mousemouse

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops9Q3U898 Atxn1-201ENSMUST00000091628 10569 ntAPPRIS P3 TSL 1 (best) BASIC9.22□□□□□ -0.93
Cops9Q3U898 Pcdh11x-202ENSMUST00000113358 8607 ntAPPRIS P2 TSL 5 BASIC9.22□□□□□ -0.93
Cops9Q3U898 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Cops9Q3U898 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC9.22□□□□□ -0.93
Cops9Q3U898 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
Cops9Q3U898 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC9.22□□□□□ -0.93
Cops9Q3U898 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC9.22□□□□□ -0.93
Cops9Q3U898 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Cops9Q3U898 9030624J02Rik-202ENSMUST00000059390 5097 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Cops9Q3U898 C4a-207ENSMUST00000160679 5371 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Cops9Q3U898 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC9.22□□□□□ -0.93
Cops9Q3U898 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Cops9Q3U898 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC9.22□□□□□ -0.93
Cops9Q3U898 Gm45242-201ENSMUST00000210666 2129 ntBASIC9.22□□□□□ -0.93
Cops9Q3U898 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC9.22□□□□□ -0.93
Cops9Q3U898 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Cops9Q3U898 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC9.22□□□□□ -0.93
Cops9Q3U898 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Cops9Q3U898 Arhgef4-204ENSMUST00000159747 6514 ntAPPRIS ALT2 TSL 5 BASIC9.22□□□□□ -0.93
Cops9Q3U898 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Cops9Q3U898 Dock6-207ENSMUST00000217336 6880 ntAPPRIS P2 TSL 5 BASIC9.22□□□□□ -0.93
Cops9Q3U898 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Cops9Q3U898 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Cops9Q3U898 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC9.22□□□□□ -0.93
Cops9Q3U898 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
Cops9Q3U898 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
Cops9Q3U898 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Cops9Q3U898 Gm12644-201ENSMUST00000119935 606 ntBASIC9.22□□□□□ -0.93
Cops9Q3U898 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC9.22□□□□□ -0.93
Cops9Q3U898 Gm12669-201ENSMUST00000122162 1009 ntBASIC9.22□□□□□ -0.93
Cops9Q3U898 Gm11780-201ENSMUST00000136880 516 ntBASIC9.22□□□□□ -0.93
Cops9Q3U898 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Cops9Q3U898 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC9.22□□□□□ -0.93
Cops9Q3U898 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC9.22□□□□□ -0.93
Cops9Q3U898 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC9.22□□□□□ -0.93
Cops9Q3U898 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC9.22□□□□□ -0.93
Cops9Q3U898 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Cops9Q3U898 Gm29741-201ENSMUST00000192667 421 ntBASIC9.22□□□□□ -0.93
Cops9Q3U898 Ighv8-14-201ENSMUST00000196781 358 ntBASIC9.22□□□□□ -0.93
Cops9Q3U898 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Cops9Q3U898 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Cops9Q3U898 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC9.22□□□□□ -0.93
Cops9Q3U898 Cmtm5-203ENSMUST00000227441 610 ntBASIC9.22□□□□□ -0.93
Cops9Q3U898 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Cops9Q3U898 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC9.22□□□□□ -0.93
Cops9Q3U898 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Cops9Q3U898 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Cops9Q3U898 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC9.22□□□□□ -0.93
Cops9Q3U898 Phip-201ENSMUST00000034787 10756 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Cops9Q3U898 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC9.22□□□□□ -0.93
Cops9Q3U898 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Cops9Q3U898 Xirp1-201ENSMUST00000111635 5839 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Cops9Q3U898 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Cops9Q3U898 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC9.22□□□□□ -0.93
Cops9Q3U898 Gm26846-201ENSMUST00000181865 4869 ntTSL 5 BASIC9.22□□□□□ -0.93
Cops9Q3U898 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Cops9Q3U898 Tom1l2-206ENSMUST00000102683 4999 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Cops9Q3U898 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Cops9Q3U898 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC9.21□□□□□ -0.93
Cops9Q3U898 CT025626.1-201ENSMUST00000223735 1455 ntBASIC9.21□□□□□ -0.93
Cops9Q3U898 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC9.21□□□□□ -0.93
Cops9Q3U898 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.93
Cops9Q3U898 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC9.21□□□□□ -0.93
Cops9Q3U898 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
Cops9Q3U898 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Cops9Q3U898 Cbfa2t3-203ENSMUST00000127984 7645 ntAPPRIS P3 TSL 1 (best) BASIC9.21□□□□□ -0.93
Cops9Q3U898 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC9.21□□□□□ -0.93
Cops9Q3U898 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC9.21□□□□□ -0.93
Cops9Q3U898 Siglec1-203ENSMUST00000110227 5790 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.93
Cops9Q3U898 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Cops9Q3U898 Gabra1-201ENSMUST00000020707 4688 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Cops9Q3U898 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
Cops9Q3U898 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
Cops9Q3U898 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.93
Cops9Q3U898 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Cops9Q3U898 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC9.21□□□□□ -0.93
Cops9Q3U898 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC9.21□□□□□ -0.94
Cops9Q3U898 Gm15957-201ENSMUST00000118893 974 ntBASIC9.21□□□□□ -0.94
Cops9Q3U898 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC9.21□□□□□ -0.94
Cops9Q3U898 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC9.21□□□□□ -0.94
Cops9Q3U898 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Cops9Q3U898 Gm5479-201ENSMUST00000160578 435 ntBASIC9.21□□□□□ -0.94
Cops9Q3U898 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Cops9Q3U898 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC9.21□□□□□ -0.94
Cops9Q3U898 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Cops9Q3U898 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Cops9Q3U898 AL672049.1-201ENSMUST00000197943 91 ntBASIC9.21□□□□□ -0.94
Cops9Q3U898 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Cops9Q3U898 AC121577.1-201ENSMUST00000227302 707 ntBASIC9.21□□□□□ -0.94
Cops9Q3U898 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Cops9Q3U898 Gm37422-201ENSMUST00000193794 4718 ntBASIC9.21□□□□□ -0.94
Cops9Q3U898 Tardbp-210ENSMUST00000172073 6513 ntTSL 5 BASIC9.21□□□□□ -0.94
Cops9Q3U898 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC9.21□□□□□ -0.94
Cops9Q3U898 AC119177.1-201ENSMUST00000227647 1332 ntBASIC9.21□□□□□ -0.94
Cops9Q3U898 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Cops9Q3U898 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC9.21□□□□□ -0.94
Cops9Q3U898 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC9.21□□□□□ -0.94
Cops9Q3U898 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC9.21□□□□□ -0.94
Cops9Q3U898 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.94
Cops9Q3U898 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms