Protein–RNA interactions for Protein: Q3U1D9

UPF0602 protein C4orf47 homolog, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3U1D9 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Q3U1D9 Gm12033-201ENSMUST00000180654 1002 ntBASIC11.73□□□□□ -0.53
Q3U1D9 Gm5559-201ENSMUST00000180755 1002 ntBASIC11.73□□□□□ -0.53
Q3U1D9 Gm4335-201ENSMUST00000182581 1004 ntBASIC11.73□□□□□ -0.53
Q3U1D9 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Q3U1D9 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Q3U1D9 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Q3U1D9 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Q3U1D9 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC11.73□□□□□ -0.53
Q3U1D9 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Q3U1D9 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Q3U1D9 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Q3U1D9 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Q3U1D9 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC11.73□□□□□ -0.53
Q3U1D9 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Q3U1D9 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Q3U1D9 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Q3U1D9 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Q3U1D9 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Q3U1D9 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Q3U1D9 Gm9899-201ENSMUST00000065519 555 ntBASIC11.73□□□□□ -0.53
Q3U1D9 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Q3U1D9 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Q3U1D9 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Q3U1D9 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Q3U1D9 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Q3U1D9 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Q3U1D9 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Q3U1D9 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Q3U1D9 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Q3U1D9 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Q3U1D9 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Q3U1D9 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Q3U1D9 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Q3U1D9 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
Q3U1D9 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
Q3U1D9 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Q3U1D9 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Q3U1D9 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Q3U1D9 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Q3U1D9 Gm38391-201ENSMUST00000191720 4069 ntBASIC11.72□□□□□ -0.53
Q3U1D9 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC11.72□□□□□ -0.53
Q3U1D9 Pcgf5-211ENSMUST00000225920 6443 ntBASIC11.72□□□□□ -0.53
Q3U1D9 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Q3U1D9 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Q3U1D9 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Q3U1D9 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Q3U1D9 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Q3U1D9 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Q3U1D9 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Q3U1D9 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Q3U1D9 Mir1938-201ENSMUST00000158746 100 ntBASIC11.72□□□□□ -0.53
Q3U1D9 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Q3U1D9 Gm29127-201ENSMUST00000188304 517 ntBASIC11.72□□□□□ -0.53
Q3U1D9 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC11.72□□□□□ -0.53
Q3U1D9 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Q3U1D9 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC11.72□□□□□ -0.53
Q3U1D9 AC125350.2-201ENSMUST00000224737 727 ntBASIC11.72□□□□□ -0.53
Q3U1D9 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Q3U1D9 Gm16372-201ENSMUST00000073088 450 ntBASIC11.72□□□□□ -0.53
Q3U1D9 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Q3U1D9 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Q3U1D9 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Q3U1D9 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Q3U1D9 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC11.72□□□□□ -0.53
Q3U1D9 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Q3U1D9 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Q3U1D9 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Q3U1D9 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Q3U1D9 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Q3U1D9 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Q3U1D9 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Q3U1D9 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Q3U1D9 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC11.72□□□□□ -0.53
Q3U1D9 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Q3U1D9 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Q3U1D9 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Q3U1D9 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Q3U1D9 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Q3U1D9 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Q3U1D9 Gm26513-201ENSMUST00000181802 2489 ntBASIC11.71□□□□□ -0.53
Q3U1D9 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Q3U1D9 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC11.71□□□□□ -0.53
Q3U1D9 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Q3U1D9 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Q3U1D9 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Q3U1D9 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Q3U1D9 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Q3U1D9 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Q3U1D9 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC11.71□□□□□ -0.53
Q3U1D9 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC11.71□□□□□ -0.53
Q3U1D9 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC11.71□□□□□ -0.53
Q3U1D9 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Q3U1D9 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Q3U1D9 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Q3U1D9 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Q3U1D9 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Q3U1D9 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Q3U1D9 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC11.71□□□□□ -0.53
Q3U1D9 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC11.71□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 83.8 ms