Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Chd8Q09XV5 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Chd8Q09XV5 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC11.97□□□□□ -0.49
Chd8Q09XV5 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Chd8Q09XV5 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Chd8Q09XV5 Poc1a-209ENSMUST00000216228 1431 ntTSL 5 BASIC11.97□□□□□ -0.49
Chd8Q09XV5 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Chd8Q09XV5 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC11.97□□□□□ -0.49
Chd8Q09XV5 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Chd8Q09XV5 Cntrobos-201ENSMUST00000132834 383 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Chd8Q09XV5 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC11.97□□□□□ -0.49
Chd8Q09XV5 Gm9507-202ENSMUST00000180157 654 ntBASIC11.97□□□□□ -0.49
Chd8Q09XV5 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Chd8Q09XV5 Gm2517-201ENSMUST00000215651 348 ntBASIC11.97□□□□□ -0.49
Chd8Q09XV5 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Chd8Q09XV5 Ginm1-202ENSMUST00000065124 300 ntBASIC11.97□□□□□ -0.49
Chd8Q09XV5 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Chd8Q09XV5 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC11.97□□□□□ -0.49
Chd8Q09XV5 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Chd8Q09XV5 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Chd8Q09XV5 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Chd8Q09XV5 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Chd8Q09XV5 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC11.97□□□□□ -0.49
Chd8Q09XV5 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Chd8Q09XV5 Samd13-202ENSMUST00000125965 1590 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Chd8Q09XV5 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Chd8Q09XV5 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Chd8Q09XV5 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Chd8Q09XV5 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Chd8Q09XV5 Gm11783-201ENSMUST00000119549 885 ntBASIC11.96□□□□□ -0.49
Chd8Q09XV5 Gm6039-201ENSMUST00000121667 1250 ntBASIC11.96□□□□□ -0.49
Chd8Q09XV5 Gm15976-201ENSMUST00000129701 429 ntTSL 3 BASIC11.96□□□□□ -0.49
Chd8Q09XV5 Slc1a3-208ENSMUST00000157065 728 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Chd8Q09XV5 4930405O22Rik-201ENSMUST00000164605 954 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Chd8Q09XV5 Gm25998-201ENSMUST00000175397 53 ntBASIC11.96□□□□□ -0.49
Chd8Q09XV5 Mir133a-1hg-201ENSMUST00000179771 395 ntTSL 3 BASIC11.96□□□□□ -0.49
Chd8Q09XV5 Gm17812-201ENSMUST00000204935 318 ntBASIC11.96□□□□□ -0.49
Chd8Q09XV5 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC11.96□□□□□ -0.49
Chd8Q09XV5 AC113031.8-201ENSMUST00000227856 631 ntBASIC11.96□□□□□ -0.49
Chd8Q09XV5 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Chd8Q09XV5 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Chd8Q09XV5 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Chd8Q09XV5 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC11.96□□□□□ -0.49
Chd8Q09XV5 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Chd8Q09XV5 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
Chd8Q09XV5 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Chd8Q09XV5 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Chd8Q09XV5 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Chd8Q09XV5 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Chd8Q09XV5 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Chd8Q09XV5 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC11.96□□□□□ -0.5
Chd8Q09XV5 Mir744-201ENSMUST00000103261 100 ntBASIC11.96□□□□□ -0.5
Chd8Q09XV5 Wfdc3-202ENSMUST00000109328 726 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Chd8Q09XV5 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Chd8Q09XV5 Atp6v1g2-202ENSMUST00000118384 483 ntTSL 2 BASIC11.96□□□□□ -0.5
Chd8Q09XV5 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.5
Chd8Q09XV5 Gm26185-201ENSMUST00000157692 266 ntBASIC11.96□□□□□ -0.5
Chd8Q09XV5 9330179D12Rik-201ENSMUST00000180569 1105 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Chd8Q09XV5 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Chd8Q09XV5 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC11.96□□□□□ -0.5
Chd8Q09XV5 Gadd45a-206ENSMUST00000204282 460 ntTSL 5 BASIC11.96□□□□□ -0.5
Chd8Q09XV5 Ensa-202ENSMUST00000058230 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Chd8Q09XV5 n-R5s77-201ENSMUST00000083757 119 ntBASIC11.96□□□□□ -0.5
Chd8Q09XV5 Gm42473-201ENSMUST00000201056 2291 ntBASIC11.96□□□□□ -0.5
Chd8Q09XV5 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Chd8Q09XV5 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC11.96□□□□□ -0.5
Chd8Q09XV5 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC11.96□□□□□ -0.5
Chd8Q09XV5 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Chd8Q09XV5 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Chd8Q09XV5 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Chd8Q09XV5 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Chd8Q09XV5 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Chd8Q09XV5 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Chd8Q09XV5 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Chd8Q09XV5 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC11.95□□□□□ -0.5
Chd8Q09XV5 Gm26989-201ENSMUST00000182608 749 ntBASIC11.95□□□□□ -0.5
Chd8Q09XV5 1700063K16Rik-201ENSMUST00000190306 369 ntBASIC11.95□□□□□ -0.5
Chd8Q09XV5 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC11.95□□□□□ -0.5
Chd8Q09XV5 Gm45310-201ENSMUST00000210436 275 ntBASIC11.95□□□□□ -0.5
Chd8Q09XV5 Aprt-ps-201ENSMUST00000212311 505 ntBASIC11.95□□□□□ -0.5
Chd8Q09XV5 CT009713.8-201ENSMUST00000225448 560 ntBASIC11.95□□□□□ -0.5
Chd8Q09XV5 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Chd8Q09XV5 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Chd8Q09XV5 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Chd8Q09XV5 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC11.95□□□□□ -0.5
Chd8Q09XV5 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Chd8Q09XV5 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Chd8Q09XV5 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Chd8Q09XV5 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Chd8Q09XV5 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Chd8Q09XV5 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Chd8Q09XV5 Smim8-204ENSMUST00000108133 935 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Chd8Q09XV5 Vbp1-202ENSMUST00000114070 632 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Chd8Q09XV5 Gm14058-201ENSMUST00000116082 735 ntBASIC11.95□□□□□ -0.5
Chd8Q09XV5 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Chd8Q09XV5 Gm14314-201ENSMUST00000118225 1015 ntBASIC11.95□□□□□ -0.5
Chd8Q09XV5 Gm9166-201ENSMUST00000120293 561 ntBASIC11.95□□□□□ -0.5
Chd8Q09XV5 2810408I11Rik-201ENSMUST00000122813 435 ntTSL 2 BASIC11.95□□□□□ -0.5
Chd8Q09XV5 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC11.95□□□□□ -0.5
Chd8Q09XV5 Gm5896-201ENSMUST00000189662 1024 ntBASIC11.95□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms