Protein–RNA interactions for Protein: Q07643

Col9a2, Collagen alpha-2(IX) chain, mousemouse

Predictions only

Length 688 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a2Q07643 Gm12384-201ENSMUST00000119228 919 ntBASIC14.6□□□□□ -0.07
Col9a2Q07643 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Col9a2Q07643 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC14.6□□□□□ -0.07
Col9a2Q07643 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Col9a2Q07643 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC14.6□□□□□ -0.07
Col9a2Q07643 Gm45331-201ENSMUST00000209868 554 ntBASIC14.6□□□□□ -0.07
Col9a2Q07643 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC14.6□□□□□ -0.07
Col9a2Q07643 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Col9a2Q07643 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Col9a2Q07643 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Col9a2Q07643 Gm10478-201ENSMUST00000084451 396 ntBASIC14.6□□□□□ -0.07
Col9a2Q07643 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Col9a2Q07643 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Col9a2Q07643 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC14.6□□□□□ -0.07
Col9a2Q07643 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Col9a2Q07643 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Col9a2Q07643 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Col9a2Q07643 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Col9a2Q07643 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC14.6□□□□□ -0.07
Col9a2Q07643 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Col9a2Q07643 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Col9a2Q07643 Gm45684-201ENSMUST00000210244 1571 ntBASIC14.6□□□□□ -0.07
Col9a2Q07643 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Col9a2Q07643 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Col9a2Q07643 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Col9a2Q07643 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Col9a2Q07643 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Col9a2Q07643 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Col9a2Q07643 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC14.59□□□□□ -0.07
Col9a2Q07643 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Col9a2Q07643 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Col9a2Q07643 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Col9a2Q07643 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC14.59□□□□□ -0.07
Col9a2Q07643 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Col9a2Q07643 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC14.59□□□□□ -0.07
Col9a2Q07643 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC14.59□□□□□ -0.07
Col9a2Q07643 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Col9a2Q07643 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Col9a2Q07643 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC14.59□□□□□ -0.07
Col9a2Q07643 Gm6222-202ENSMUST00000182143 629 ntBASIC14.59□□□□□ -0.07
Col9a2Q07643 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC14.59□□□□□ -0.07
Col9a2Q07643 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC14.59□□□□□ -0.07
Col9a2Q07643 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Col9a2Q07643 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Col9a2Q07643 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Col9a2Q07643 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Col9a2Q07643 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Col9a2Q07643 Ptprs-211ENSMUST00000223859 5588 ntBASIC14.59□□□□□ -0.07
Col9a2Q07643 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Col9a2Q07643 Gm11661-201ENSMUST00000121761 1327 ntBASIC14.59□□□□□ -0.07
Col9a2Q07643 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Col9a2Q07643 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC14.59□□□□□ -0.07
Col9a2Q07643 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Col9a2Q07643 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Col9a2Q07643 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC14.59□□□□□ -0.07
Col9a2Q07643 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Col9a2Q07643 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Col9a2Q07643 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Col9a2Q07643 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC14.58□□□□□ -0.07
Col9a2Q07643 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Col9a2Q07643 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Col9a2Q07643 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC14.58□□□□□ -0.07
Col9a2Q07643 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Col9a2Q07643 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Col9a2Q07643 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Col9a2Q07643 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Col9a2Q07643 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Col9a2Q07643 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Col9a2Q07643 Mir686-201ENSMUST00000102174 109 ntBASIC14.58□□□□□ -0.08
Col9a2Q07643 Gm11618-201ENSMUST00000117946 267 ntBASIC14.58□□□□□ -0.08
Col9a2Q07643 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Col9a2Q07643 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC14.58□□□□□ -0.08
Col9a2Q07643 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC14.58□□□□□ -0.08
Col9a2Q07643 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC14.58□□□□□ -0.08
Col9a2Q07643 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Col9a2Q07643 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Col9a2Q07643 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Col9a2Q07643 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Col9a2Q07643 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Col9a2Q07643 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Col9a2Q07643 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Col9a2Q07643 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Col9a2Q07643 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Col9a2Q07643 AC154725.1-201ENSMUST00000224826 1961 ntBASIC14.58□□□□□ -0.08
Col9a2Q07643 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Col9a2Q07643 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Col9a2Q07643 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Col9a2Q07643 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.08
Col9a2Q07643 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Col9a2Q07643 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Col9a2Q07643 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
Col9a2Q07643 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
Col9a2Q07643 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Col9a2Q07643 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Col9a2Q07643 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC14.57□□□□□ -0.08
Col9a2Q07643 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Col9a2Q07643 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Col9a2Q07643 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC14.57□□□□□ -0.08
Col9a2Q07643 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Col9a2Q07643 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms