Protein–RNA interactions for Protein: Q07424

Cdx4, Homeobox protein CDX-4, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx4Q07424 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Cdx4Q07424 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
Cdx4Q07424 Gm30238-201ENSMUST00000195528 2603 ntBASIC10.46□□□□□ -0.73
Cdx4Q07424 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Cdx4Q07424 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Cdx4Q07424 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Cdx4Q07424 Gm4804-201ENSMUST00000182234 999 ntBASIC10.46□□□□□ -0.73
Cdx4Q07424 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC10.46□□□□□ -0.73
Cdx4Q07424 Gm29667-201ENSMUST00000190817 490 ntBASIC10.46□□□□□ -0.73
Cdx4Q07424 Gm6916-202ENSMUST00000205523 195 ntBASIC10.46□□□□□ -0.73
Cdx4Q07424 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Cdx4Q07424 Gm6218-201ENSMUST00000219812 628 ntBASIC10.46□□□□□ -0.73
Cdx4Q07424 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC10.46□□□□□ -0.73
Cdx4Q07424 AC149294.4-201ENSMUST00000227870 882 ntBASIC10.46□□□□□ -0.73
Cdx4Q07424 AC154806.6-201ENSMUST00000228192 202 ntBASIC10.46□□□□□ -0.73
Cdx4Q07424 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC10.46□□□□□ -0.73
Cdx4Q07424 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Cdx4Q07424 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC10.46□□□□□ -0.74
Cdx4Q07424 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Cdx4Q07424 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Cdx4Q07424 Gm12626-201ENSMUST00000117339 1983 ntBASIC10.46□□□□□ -0.74
Cdx4Q07424 Gm12623-201ENSMUST00000119849 1983 ntBASIC10.46□□□□□ -0.74
Cdx4Q07424 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Cdx4Q07424 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Cdx4Q07424 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Cdx4Q07424 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Cdx4Q07424 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Cdx4Q07424 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Cdx4Q07424 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Cdx4Q07424 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Cdx4Q07424 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.74
Cdx4Q07424 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Cdx4Q07424 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Cdx4Q07424 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC10.46□□□□□ -0.74
Cdx4Q07424 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cdx4Q07424 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
Cdx4Q07424 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cdx4Q07424 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cdx4Q07424 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC10.45□□□□□ -0.74
Cdx4Q07424 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cdx4Q07424 Gm2420-202ENSMUST00000202224 2249 ntBASIC10.45□□□□□ -0.74
Cdx4Q07424 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cdx4Q07424 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Cdx4Q07424 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Cdx4Q07424 Gm6159-201ENSMUST00000191249 1724 ntBASIC10.45□□□□□ -0.74
Cdx4Q07424 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Cdx4Q07424 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Cdx4Q07424 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
Cdx4Q07424 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cdx4Q07424 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cdx4Q07424 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC10.45□□□□□ -0.74
Cdx4Q07424 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cdx4Q07424 Gm12585-201ENSMUST00000117307 290 ntBASIC10.45□□□□□ -0.74
Cdx4Q07424 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC10.45□□□□□ -0.74
Cdx4Q07424 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC10.45□□□□□ -0.74
Cdx4Q07424 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC10.45□□□□□ -0.74
Cdx4Q07424 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Cdx4Q07424 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC10.45□□□□□ -0.74
Cdx4Q07424 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC10.45□□□□□ -0.74
Cdx4Q07424 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC10.45□□□□□ -0.74
Cdx4Q07424 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Cdx4Q07424 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Cdx4Q07424 Gm9522-201ENSMUST00000182394 926 ntBASIC10.45□□□□□ -0.74
Cdx4Q07424 H2-Pa-201ENSMUST00000182803 626 ntBASIC10.45□□□□□ -0.74
Cdx4Q07424 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Cdx4Q07424 Gm8515-201ENSMUST00000194852 576 ntBASIC10.45□□□□□ -0.74
Cdx4Q07424 Gm18027-201ENSMUST00000218947 619 ntBASIC10.45□□□□□ -0.74
Cdx4Q07424 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC10.45□□□□□ -0.74
Cdx4Q07424 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC10.45□□□□□ -0.74
Cdx4Q07424 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cdx4Q07424 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Cdx4Q07424 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC10.45□□□□□ -0.74
Cdx4Q07424 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cdx4Q07424 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Cdx4Q07424 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cdx4Q07424 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
Cdx4Q07424 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
Cdx4Q07424 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cdx4Q07424 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cdx4Q07424 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cdx4Q07424 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cdx4Q07424 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cdx4Q07424 AC126549.2-201ENSMUST00000223997 1976 ntBASIC10.45□□□□□ -0.74
Cdx4Q07424 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Cdx4Q07424 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC10.44□□□□□ -0.74
Cdx4Q07424 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Cdx4Q07424 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Cdx4Q07424 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
Cdx4Q07424 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC10.44□□□□□ -0.74
Cdx4Q07424 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
Cdx4Q07424 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Cdx4Q07424 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Cdx4Q07424 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Cdx4Q07424 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Cdx4Q07424 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Cdx4Q07424 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Cdx4Q07424 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Cdx4Q07424 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
Cdx4Q07424 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC10.44□□□□□ -0.74
Cdx4Q07424 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms