Protein–RNA interactions for Protein: Q00422

Gabpa, GA-binding protein alpha chain, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GabpaQ00422 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
GabpaQ00422 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
GabpaQ00422 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
GabpaQ00422 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
GabpaQ00422 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
GabpaQ00422 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
GabpaQ00422 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
GabpaQ00422 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC15.29■□□□□ 0.04
GabpaQ00422 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
GabpaQ00422 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
GabpaQ00422 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
GabpaQ00422 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
GabpaQ00422 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
GabpaQ00422 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC15.28■□□□□ 0.04
GabpaQ00422 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
GabpaQ00422 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC15.28■□□□□ 0.04
GabpaQ00422 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GabpaQ00422 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GabpaQ00422 Gm12846-201ENSMUST00000120431 1373 ntBASIC15.28■□□□□ 0.04
GabpaQ00422 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC15.28■□□□□ 0.04
GabpaQ00422 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GabpaQ00422 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GabpaQ00422 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
GabpaQ00422 Gm5620-201ENSMUST00000077991 1348 ntBASIC15.28■□□□□ 0.04
GabpaQ00422 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
GabpaQ00422 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GabpaQ00422 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
GabpaQ00422 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
GabpaQ00422 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GabpaQ00422 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
GabpaQ00422 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC15.28■□□□□ 0.04
GabpaQ00422 Gm6447-201ENSMUST00000118905 835 ntBASIC15.28■□□□□ 0.04
GabpaQ00422 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
GabpaQ00422 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC15.28■□□□□ 0.04
GabpaQ00422 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC15.28■□□□□ 0.04
GabpaQ00422 Gm19184-201ENSMUST00000196798 928 ntBASIC15.28■□□□□ 0.04
GabpaQ00422 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC15.28■□□□□ 0.04
GabpaQ00422 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GabpaQ00422 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GabpaQ00422 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
GabpaQ00422 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GabpaQ00422 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
GabpaQ00422 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
GabpaQ00422 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
GabpaQ00422 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC15.28■□□□□ 0.04
GabpaQ00422 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
GabpaQ00422 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
GabpaQ00422 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
GabpaQ00422 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
GabpaQ00422 Gm8706-201ENSMUST00000197372 1491 ntBASIC15.27■□□□□ 0.04
GabpaQ00422 Gm12500-202ENSMUST00000186471 2428 ntBASIC15.27■□□□□ 0.04
GabpaQ00422 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC15.27■□□□□ 0.04
GabpaQ00422 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC15.27■□□□□ 0.04
GabpaQ00422 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
GabpaQ00422 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC15.27■□□□□ 0.04
GabpaQ00422 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
GabpaQ00422 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC15.27■□□□□ 0.04
GabpaQ00422 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
GabpaQ00422 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
GabpaQ00422 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
GabpaQ00422 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC15.27■□□□□ 0.04
GabpaQ00422 Mir1247-201ENSMUST00000116706 82 ntBASIC15.27■□□□□ 0.04
GabpaQ00422 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
GabpaQ00422 Gm5940-201ENSMUST00000117582 1068 ntBASIC15.27■□□□□ 0.04
GabpaQ00422 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC15.27■□□□□ 0.04
GabpaQ00422 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC15.27■□□□□ 0.04
GabpaQ00422 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC15.27■□□□□ 0.04
GabpaQ00422 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
GabpaQ00422 Gm44069-201ENSMUST00000204898 506 ntBASIC15.27■□□□□ 0.04
GabpaQ00422 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
GabpaQ00422 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
GabpaQ00422 AC159896.2-201ENSMUST00000214753 269 ntBASIC15.27■□□□□ 0.04
GabpaQ00422 AC154319.1-201ENSMUST00000216330 312 ntBASIC15.27■□□□□ 0.04
GabpaQ00422 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC15.27■□□□□ 0.04
GabpaQ00422 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
GabpaQ00422 AL589735.1-201ENSMUST00000224353 270 ntBASIC15.27■□□□□ 0.04
GabpaQ00422 Gm7399-201ENSMUST00000032395 858 ntBASIC15.27■□□□□ 0.04
GabpaQ00422 Gm10146-201ENSMUST00000072739 309 ntBASIC15.27■□□□□ 0.04
GabpaQ00422 Gm16372-201ENSMUST00000073088 450 ntBASIC15.27■□□□□ 0.04
GabpaQ00422 Gm10268-201ENSMUST00000085340 555 ntBASIC15.27■□□□□ 0.04
GabpaQ00422 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC15.27■□□□□ 0.03
GabpaQ00422 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
GabpaQ00422 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
GabpaQ00422 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
GabpaQ00422 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
GabpaQ00422 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
GabpaQ00422 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
GabpaQ00422 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC15.26■□□□□ 0.03
GabpaQ00422 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
GabpaQ00422 Gm11661-201ENSMUST00000121761 1327 ntBASIC15.26■□□□□ 0.03
GabpaQ00422 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
GabpaQ00422 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
GabpaQ00422 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
GabpaQ00422 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC15.26■□□□□ 0.03
GabpaQ00422 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC15.26■□□□□ 0.03
GabpaQ00422 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC15.26■□□□□ 0.03
GabpaQ00422 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
GabpaQ00422 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
GabpaQ00422 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC15.26■□□□□ 0.03
GabpaQ00422 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms