Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Smarcc1P97496 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Smarcc1P97496 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Smarcc1P97496 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Smarcc1P97496 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC16.84■□□□□ 0.29
Smarcc1P97496 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Smarcc1P97496 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Smarcc1P97496 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Smarcc1P97496 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Smarcc1P97496 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Smarcc1P97496 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
Smarcc1P97496 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Smarcc1P97496 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Smarcc1P97496 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Smarcc1P97496 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
Smarcc1P97496 Ap5m1-205ENSMUST00000227431 3757 ntBASIC16.83■□□□□ 0.29
Smarcc1P97496 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
Smarcc1P97496 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC16.83■□□□□ 0.29
Smarcc1P97496 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Smarcc1P97496 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Smarcc1P97496 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Smarcc1P97496 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Smarcc1P97496 Gm11637-201ENSMUST00000120601 592 ntBASIC16.83■□□□□ 0.28
Smarcc1P97496 Gm12363-201ENSMUST00000122250 668 ntBASIC16.83■□□□□ 0.28
Smarcc1P97496 Gm26185-201ENSMUST00000157692 266 ntBASIC16.83■□□□□ 0.28
Smarcc1P97496 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC16.83■□□□□ 0.28
Smarcc1P97496 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC16.83■□□□□ 0.28
Smarcc1P97496 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC16.83■□□□□ 0.28
Smarcc1P97496 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Smarcc1P97496 Rps4l-202ENSMUST00000204242 789 ntBASIC16.83■□□□□ 0.28
Smarcc1P97496 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Smarcc1P97496 CT025533.2-201ENSMUST00000228715 1248 ntBASIC16.83■□□□□ 0.28
Smarcc1P97496 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Smarcc1P97496 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Smarcc1P97496 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Smarcc1P97496 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Smarcc1P97496 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Smarcc1P97496 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Smarcc1P97496 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Smarcc1P97496 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Smarcc1P97496 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Smarcc1P97496 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
Smarcc1P97496 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Smarcc1P97496 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Smarcc1P97496 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Smarcc1P97496 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Smarcc1P97496 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Smarcc1P97496 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Smarcc1P97496 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Smarcc1P97496 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smarcc1P97496 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smarcc1P97496 Gm43423-201ENSMUST00000198390 2094 ntBASIC16.82■□□□□ 0.28
Smarcc1P97496 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smarcc1P97496 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smarcc1P97496 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC16.82■□□□□ 0.28
Smarcc1P97496 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smarcc1P97496 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Smarcc1P97496 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smarcc1P97496 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smarcc1P97496 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC16.82■□□□□ 0.28
Smarcc1P97496 Gm11964-201ENSMUST00000120982 444 ntBASIC16.82■□□□□ 0.28
Smarcc1P97496 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Smarcc1P97496 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC16.82■□□□□ 0.28
Smarcc1P97496 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Smarcc1P97496 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smarcc1P97496 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC16.82■□□□□ 0.28
Smarcc1P97496 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC16.82■□□□□ 0.28
Smarcc1P97496 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC16.82■□□□□ 0.28
Smarcc1P97496 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Smarcc1P97496 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC16.82■□□□□ 0.28
Smarcc1P97496 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smarcc1P97496 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smarcc1P97496 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Smarcc1P97496 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smarcc1P97496 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smarcc1P97496 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC16.82■□□□□ 0.28
Smarcc1P97496 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Smarcc1P97496 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Smarcc1P97496 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Smarcc1P97496 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Smarcc1P97496 Gm38049-201ENSMUST00000195698 1372 ntBASIC16.81■□□□□ 0.28
Smarcc1P97496 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Smarcc1P97496 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Smarcc1P97496 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Smarcc1P97496 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Smarcc1P97496 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC16.81■□□□□ 0.28
Smarcc1P97496 Gm16505-201ENSMUST00000179981 232 ntBASIC16.81■□□□□ 0.28
Smarcc1P97496 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC16.81■□□□□ 0.28
Smarcc1P97496 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Smarcc1P97496 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC16.81■□□□□ 0.28
Smarcc1P97496 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Smarcc1P97496 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Smarcc1P97496 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Smarcc1P97496 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Smarcc1P97496 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC16.81■□□□□ 0.28
Smarcc1P97496 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Smarcc1P97496 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Smarcc1P97496 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Smarcc1P97496 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Smarcc1P97496 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms