Protein–RNA interactions for Protein: P86448

Trim43b, Tripartite motif-containing protein 43B, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43bP86448 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim43bP86448 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC13.93□□□□□ -0.18
Trim43bP86448 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim43bP86448 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Trim43bP86448 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC13.93□□□□□ -0.18
Trim43bP86448 Gm27437-201ENSMUST00000183429 107 ntBASIC13.93□□□□□ -0.18
Trim43bP86448 Gm27631-201ENSMUST00000184163 466 ntBASIC13.93□□□□□ -0.18
Trim43bP86448 Gm44608-201ENSMUST00000206827 855 ntBASIC13.93□□□□□ -0.18
Trim43bP86448 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC13.93□□□□□ -0.18
Trim43bP86448 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim43bP86448 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim43bP86448 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim43bP86448 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC13.93□□□□□ -0.18
Trim43bP86448 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim43bP86448 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim43bP86448 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim43bP86448 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim43bP86448 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim43bP86448 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim43bP86448 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trim43bP86448 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trim43bP86448 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim43bP86448 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC13.92□□□□□ -0.18
Trim43bP86448 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim43bP86448 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim43bP86448 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim43bP86448 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim43bP86448 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Trim43bP86448 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC13.92□□□□□ -0.18
Trim43bP86448 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trim43bP86448 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim43bP86448 Gm5320-201ENSMUST00000207163 1519 ntBASIC13.92□□□□□ -0.18
Trim43bP86448 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim43bP86448 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC13.92□□□□□ -0.18
Trim43bP86448 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trim43bP86448 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim43bP86448 Gm3436-201ENSMUST00000179930 840 ntBASIC13.92□□□□□ -0.18
Trim43bP86448 Gm27838-201ENSMUST00000184829 128 ntBASIC13.92□□□□□ -0.18
Trim43bP86448 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC13.92□□□□□ -0.18
Trim43bP86448 Gm45706-201ENSMUST00000213063 2136 ntBASIC13.92□□□□□ -0.18
Trim43bP86448 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trim43bP86448 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Trim43bP86448 Shd-206ENSMUST00000225145 998 ntBASIC13.92□□□□□ -0.18
Trim43bP86448 CT030704.2-201ENSMUST00000228887 494 ntBASIC13.92□□□□□ -0.18
Trim43bP86448 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim43bP86448 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim43bP86448 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Trim43bP86448 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trim43bP86448 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC13.92□□□□□ -0.18
Trim43bP86448 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC13.92□□□□□ -0.18
Trim43bP86448 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim43bP86448 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim43bP86448 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim43bP86448 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim43bP86448 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim43bP86448 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim43bP86448 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim43bP86448 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim43bP86448 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC13.91□□□□□ -0.18
Trim43bP86448 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim43bP86448 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim43bP86448 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Trim43bP86448 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trim43bP86448 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trim43bP86448 Gm5939-201ENSMUST00000119613 2874 ntBASIC13.91□□□□□ -0.18
Trim43bP86448 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim43bP86448 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim43bP86448 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Trim43bP86448 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trim43bP86448 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trim43bP86448 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trim43bP86448 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC13.91□□□□□ -0.18
Trim43bP86448 Gm7775-201ENSMUST00000218871 853 ntBASIC13.91□□□□□ -0.18
Trim43bP86448 AC156016.3-201ENSMUST00000228623 344 ntBASIC13.91□□□□□ -0.18
Trim43bP86448 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim43bP86448 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim43bP86448 Gm27194-201ENSMUST00000175753 2936 ntBASIC13.91□□□□□ -0.18
Trim43bP86448 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Trim43bP86448 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Trim43bP86448 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim43bP86448 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim43bP86448 Gm13730-201ENSMUST00000121036 1462 ntBASIC13.91□□□□□ -0.18
Trim43bP86448 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trim43bP86448 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim43bP86448 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trim43bP86448 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim43bP86448 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim43bP86448 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim43bP86448 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim43bP86448 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim43bP86448 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC13.9□□□□□ -0.18
Trim43bP86448 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Trim43bP86448 Gm12428-201ENSMUST00000119844 727 ntBASIC13.9□□□□□ -0.18
Trim43bP86448 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Trim43bP86448 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trim43bP86448 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim43bP86448 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Trim43bP86448 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trim43bP86448 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC13.9□□□□□ -0.18
Trim43bP86448 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 63.3 ms