Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Shox2P70390 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Shox2P70390 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Shox2P70390 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Shox2P70390 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Shox2P70390 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC13.34□□□□□ -0.27
Shox2P70390 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Shox2P70390 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Shox2P70390 Gm13036-201ENSMUST00000117799 748 ntBASIC13.34□□□□□ -0.27
Shox2P70390 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Shox2P70390 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Shox2P70390 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC13.34□□□□□ -0.27
Shox2P70390 Gm45841-201ENSMUST00000207700 164 ntBASIC13.34□□□□□ -0.27
Shox2P70390 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC13.34□□□□□ -0.27
Shox2P70390 Gm18636-201ENSMUST00000218846 1066 ntBASIC13.34□□□□□ -0.27
Shox2P70390 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC13.34□□□□□ -0.27
Shox2P70390 AC090659.1-201ENSMUST00000224334 768 ntBASIC13.34□□□□□ -0.27
Shox2P70390 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Shox2P70390 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Shox2P70390 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Shox2P70390 Gm44758-201ENSMUST00000206096 2068 ntBASIC13.34□□□□□ -0.27
Shox2P70390 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Shox2P70390 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Shox2P70390 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Shox2P70390 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Shox2P70390 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Shox2P70390 Zkscan3-207ENSMUST00000223831 2101 ntBASIC13.34□□□□□ -0.27
Shox2P70390 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Shox2P70390 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
Shox2P70390 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Shox2P70390 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Shox2P70390 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Shox2P70390 Gm27177-202ENSMUST00000183514 2703 ntBASIC13.33□□□□□ -0.27
Shox2P70390 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC13.33□□□□□ -0.27
Shox2P70390 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Shox2P70390 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Shox2P70390 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Shox2P70390 Gm43045-201ENSMUST00000198725 2095 ntBASIC13.33□□□□□ -0.27
Shox2P70390 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Shox2P70390 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Shox2P70390 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC13.33□□□□□ -0.28
Shox2P70390 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Shox2P70390 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Shox2P70390 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC13.33□□□□□ -0.28
Shox2P70390 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Shox2P70390 Gm13823-201ENSMUST00000119930 345 ntBASIC13.33□□□□□ -0.28
Shox2P70390 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC13.33□□□□□ -0.28
Shox2P70390 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Shox2P70390 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Shox2P70390 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC13.33□□□□□ -0.28
Shox2P70390 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Shox2P70390 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Shox2P70390 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC13.33□□□□□ -0.28
Shox2P70390 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Shox2P70390 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Shox2P70390 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Shox2P70390 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Shox2P70390 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Shox2P70390 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Shox2P70390 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Shox2P70390 Gm36970-201ENSMUST00000193688 1859 ntBASIC13.33□□□□□ -0.28
Shox2P70390 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Shox2P70390 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Shox2P70390 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Shox2P70390 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Shox2P70390 Gm44806-201ENSMUST00000205574 2303 ntBASIC13.33□□□□□ -0.28
Shox2P70390 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Shox2P70390 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Shox2P70390 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Shox2P70390 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Shox2P70390 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Shox2P70390 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Shox2P70390 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Shox2P70390 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC13.32□□□□□ -0.28
Shox2P70390 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Shox2P70390 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Shox2P70390 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Shox2P70390 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Shox2P70390 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Shox2P70390 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Shox2P70390 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Shox2P70390 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC13.32□□□□□ -0.28
Shox2P70390 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Shox2P70390 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Shox2P70390 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Shox2P70390 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Shox2P70390 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Shox2P70390 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Shox2P70390 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC13.32□□□□□ -0.28
Shox2P70390 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC13.32□□□□□ -0.28
Shox2P70390 AC131997.1-201ENSMUST00000228611 1229 ntBASIC13.32□□□□□ -0.28
Shox2P70390 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Shox2P70390 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Shox2P70390 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Shox2P70390 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Shox2P70390 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Shox2P70390 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Shox2P70390 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Shox2P70390 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Shox2P70390 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms