Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sf3b6P59708 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC12□□□□□ -0.49
Sf3b6P59708 AC164107.1-201ENSMUST00000227730 2161 ntBASIC12□□□□□ -0.49
Sf3b6P59708 Gm45667-201ENSMUST00000210380 1316 ntBASIC12□□□□□ -0.49
Sf3b6P59708 Gm13332-201ENSMUST00000120451 1398 ntBASIC12□□□□□ -0.49
Sf3b6P59708 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sf3b6P59708 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Sf3b6P59708 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC12□□□□□ -0.49
Sf3b6P59708 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Sf3b6P59708 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sf3b6P59708 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Sf3b6P59708 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sf3b6P59708 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC12□□□□□ -0.49
Sf3b6P59708 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC12□□□□□ -0.49
Sf3b6P59708 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC12□□□□□ -0.49
Sf3b6P59708 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sf3b6P59708 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Sf3b6P59708 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Sf3b6P59708 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sf3b6P59708 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sf3b6P59708 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sf3b6P59708 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sf3b6P59708 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC11.99□□□□□ -0.49
Sf3b6P59708 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC11.99□□□□□ -0.49
Sf3b6P59708 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC11.99□□□□□ -0.49
Sf3b6P59708 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sf3b6P59708 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sf3b6P59708 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC11.99□□□□□ -0.49
Sf3b6P59708 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sf3b6P59708 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC11.99□□□□□ -0.49
Sf3b6P59708 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC11.99□□□□□ -0.49
Sf3b6P59708 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Sf3b6P59708 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC11.99□□□□□ -0.49
Sf3b6P59708 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Sf3b6P59708 Gm18889-201ENSMUST00000174284 929 ntBASIC11.99□□□□□ -0.49
Sf3b6P59708 Gm27631-201ENSMUST00000184163 466 ntBASIC11.99□□□□□ -0.49
Sf3b6P59708 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC11.99□□□□□ -0.49
Sf3b6P59708 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Sf3b6P59708 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Sf3b6P59708 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC11.99□□□□□ -0.49
Sf3b6P59708 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sf3b6P59708 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Sf3b6P59708 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sf3b6P59708 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Sf3b6P59708 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sf3b6P59708 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sf3b6P59708 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sf3b6P59708 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sf3b6P59708 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sf3b6P59708 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC11.99□□□□□ -0.49
Sf3b6P59708 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sf3b6P59708 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sf3b6P59708 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC11.99□□□□□ -0.49
Sf3b6P59708 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sf3b6P59708 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Sf3b6P59708 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sf3b6P59708 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sf3b6P59708 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Sf3b6P59708 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Sf3b6P59708 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sf3b6P59708 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sf3b6P59708 Gm7049-201ENSMUST00000223520 1712 ntBASIC11.98□□□□□ -0.49
Sf3b6P59708 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sf3b6P59708 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sf3b6P59708 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC11.98□□□□□ -0.49
Sf3b6P59708 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Sf3b6P59708 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sf3b6P59708 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC11.98□□□□□ -0.49
Sf3b6P59708 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC11.98□□□□□ -0.49
Sf3b6P59708 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Sf3b6P59708 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC11.98□□□□□ -0.49
Sf3b6P59708 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC11.98□□□□□ -0.49
Sf3b6P59708 AC166997.1-201ENSMUST00000225122 572 ntBASIC11.98□□□□□ -0.49
Sf3b6P59708 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sf3b6P59708 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sf3b6P59708 Mir125a-201ENSMUST00000083545 68 ntBASIC11.98□□□□□ -0.49
Sf3b6P59708 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Sf3b6P59708 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sf3b6P59708 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sf3b6P59708 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sf3b6P59708 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Sf3b6P59708 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sf3b6P59708 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC11.98□□□□□ -0.49
Sf3b6P59708 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Sf3b6P59708 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sf3b6P59708 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Sf3b6P59708 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC11.98□□□□□ -0.49
Sf3b6P59708 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC11.98□□□□□ -0.49
Sf3b6P59708 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Sf3b6P59708 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sf3b6P59708 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sf3b6P59708 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sf3b6P59708 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sf3b6P59708 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sf3b6P59708 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC11.97□□□□□ -0.49
Sf3b6P59708 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sf3b6P59708 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC11.97□□□□□ -0.49
Sf3b6P59708 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sf3b6P59708 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sf3b6P59708 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 11.3 ms