Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Nup43P59235 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nup43P59235 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nup43P59235 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nup43P59235 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nup43P59235 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Nup43P59235 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Nup43P59235 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nup43P59235 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nup43P59235 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Nup43P59235 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Nup43P59235 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC12.76□□□□□ -0.37
Nup43P59235 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Nup43P59235 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nup43P59235 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Nup43P59235 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nup43P59235 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Nup43P59235 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
Nup43P59235 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Nup43P59235 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nup43P59235 Gm14752-201ENSMUST00000120719 2075 ntBASIC12.76□□□□□ -0.37
Nup43P59235 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nup43P59235 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nup43P59235 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Nup43P59235 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nup43P59235 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nup43P59235 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nup43P59235 Gm13886-201ENSMUST00000117876 1183 ntBASIC12.76□□□□□ -0.37
Nup43P59235 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC12.76□□□□□ -0.37
Nup43P59235 Gm23984-201ENSMUST00000157139 203 ntBASIC12.76□□□□□ -0.37
Nup43P59235 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC12.76□□□□□ -0.37
Nup43P59235 Gm8515-201ENSMUST00000194852 576 ntBASIC12.76□□□□□ -0.37
Nup43P59235 Gm42550-201ENSMUST00000201553 960 ntBASIC12.76□□□□□ -0.37
Nup43P59235 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC12.76□□□□□ -0.37
Nup43P59235 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nup43P59235 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nup43P59235 mt-Rnr1-201ENSMUST00000082388 955 ntBASIC12.76□□□□□ -0.37
Nup43P59235 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nup43P59235 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nup43P59235 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC12.76□□□□□ -0.37
Nup43P59235 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nup43P59235 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC12.76□□□□□ -0.37
Nup43P59235 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Nup43P59235 Gm44291-201ENSMUST00000203102 2865 ntBASIC12.76□□□□□ -0.37
Nup43P59235 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nup43P59235 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Nup43P59235 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nup43P59235 Gm11405-201ENSMUST00000118689 1556 ntBASIC12.76□□□□□ -0.37
Nup43P59235 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nup43P59235 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Nup43P59235 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nup43P59235 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nup43P59235 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nup43P59235 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nup43P59235 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nup43P59235 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Nup43P59235 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nup43P59235 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Nup43P59235 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
Nup43P59235 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nup43P59235 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Nup43P59235 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC12.75□□□□□ -0.37
Nup43P59235 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Nup43P59235 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Nup43P59235 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nup43P59235 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nup43P59235 Gm12537-201ENSMUST00000119266 1002 ntBASIC12.75□□□□□ -0.37
Nup43P59235 Gm12070-201ENSMUST00000119551 1002 ntBASIC12.75□□□□□ -0.37
Nup43P59235 Gm12671-201ENSMUST00000119978 1002 ntBASIC12.75□□□□□ -0.37
Nup43P59235 Gm13292-201ENSMUST00000120014 1000 ntBASIC12.75□□□□□ -0.37
Nup43P59235 Gm12403-201ENSMUST00000121384 959 ntBASIC12.75□□□□□ -0.37
Nup43P59235 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nup43P59235 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC12.75□□□□□ -0.37
Nup43P59235 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Nup43P59235 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC12.75□□□□□ -0.37
Nup43P59235 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nup43P59235 Gm10359-201ENSMUST00000180167 1002 ntBASIC12.75□□□□□ -0.37
Nup43P59235 Gm12033-201ENSMUST00000180654 1002 ntBASIC12.75□□□□□ -0.37
Nup43P59235 Gm5559-201ENSMUST00000180755 1002 ntBASIC12.75□□□□□ -0.37
Nup43P59235 Gm4335-201ENSMUST00000182581 1004 ntBASIC12.75□□□□□ -0.37
Nup43P59235 Gm38223-201ENSMUST00000194484 695 ntBASIC12.75□□□□□ -0.37
Nup43P59235 Gm37812-201ENSMUST00000195216 2475 ntBASIC12.75□□□□□ -0.37
Nup43P59235 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Nup43P59235 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Nup43P59235 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nup43P59235 Gm2420-202ENSMUST00000202224 2249 ntBASIC12.75□□□□□ -0.37
Nup43P59235 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nup43P59235 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nup43P59235 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nup43P59235 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nup43P59235 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Nup43P59235 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Nup43P59235 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nup43P59235 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nup43P59235 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nup43P59235 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nup43P59235 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nup43P59235 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nup43P59235 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nup43P59235 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms