Protein–RNA interactions for Protein: P51448

Rora, Nuclear receptor ROR-alpha, mousemouse

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RoraP51448 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
RoraP51448 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC12.79□□□□□ -0.36
RoraP51448 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RoraP51448 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RoraP51448 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RoraP51448 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
RoraP51448 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
RoraP51448 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
RoraP51448 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RoraP51448 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
RoraP51448 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
RoraP51448 Zkscan14-203ENSMUST00000198959 2243 ntBASIC12.79□□□□□ -0.36
RoraP51448 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC12.79□□□□□ -0.36
RoraP51448 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RoraP51448 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC12.79□□□□□ -0.36
RoraP51448 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC12.79□□□□□ -0.36
RoraP51448 AC153962.4-201ENSMUST00000217878 242 ntBASIC12.79□□□□□ -0.36
RoraP51448 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RoraP51448 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RoraP51448 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RoraP51448 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RoraP51448 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
RoraP51448 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
RoraP51448 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RoraP51448 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RoraP51448 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RoraP51448 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
RoraP51448 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC12.79□□□□□ -0.36
RoraP51448 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC12.79□□□□□ -0.36
RoraP51448 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
RoraP51448 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
RoraP51448 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
RoraP51448 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RoraP51448 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
RoraP51448 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
RoraP51448 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
RoraP51448 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RoraP51448 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RoraP51448 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RoraP51448 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC12.78□□□□□ -0.36
RoraP51448 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
RoraP51448 Gm8652-201ENSMUST00000181363 964 ntBASIC12.78□□□□□ -0.36
RoraP51448 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC12.78□□□□□ -0.36
RoraP51448 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC12.78□□□□□ -0.36
RoraP51448 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RoraP51448 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
RoraP51448 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC12.78□□□□□ -0.36
RoraP51448 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RoraP51448 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
RoraP51448 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RoraP51448 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RoraP51448 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
RoraP51448 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RoraP51448 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
RoraP51448 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RoraP51448 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
RoraP51448 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
RoraP51448 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
RoraP51448 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
RoraP51448 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC12.78□□□□□ -0.36
RoraP51448 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
RoraP51448 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RoraP51448 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
RoraP51448 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
RoraP51448 Gm28182-201ENSMUST00000188354 2477 ntBASIC12.78□□□□□ -0.36
RoraP51448 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
RoraP51448 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RoraP51448 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC12.77□□□□□ -0.36
RoraP51448 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
RoraP51448 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
RoraP51448 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
RoraP51448 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
RoraP51448 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.36
RoraP51448 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
RoraP51448 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
RoraP51448 Gm13612-201ENSMUST00000119276 390 ntBASIC12.77□□□□□ -0.37
RoraP51448 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
RoraP51448 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC12.77□□□□□ -0.37
RoraP51448 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC12.77□□□□□ -0.37
RoraP51448 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC12.77□□□□□ -0.37
RoraP51448 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
RoraP51448 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
RoraP51448 AY702102-202ENSMUST00000194651 1173 ntBASIC12.77□□□□□ -0.37
RoraP51448 Gm7561-201ENSMUST00000211203 886 ntBASIC12.77□□□□□ -0.37
RoraP51448 Gm18934-201ENSMUST00000216671 1044 ntBASIC12.77□□□□□ -0.37
RoraP51448 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
RoraP51448 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
RoraP51448 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
RoraP51448 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
RoraP51448 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
RoraP51448 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
RoraP51448 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
RoraP51448 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.37
RoraP51448 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC12.77□□□□□ -0.37
RoraP51448 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
RoraP51448 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
RoraP51448 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
RoraP51448 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
RoraP51448 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC12.77□□□□□ -0.37
RoraP51448 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms