Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vps4bP46467 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC13.73□□□□□ -0.21
Vps4bP46467 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Vps4bP46467 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Vps4bP46467 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Vps4bP46467 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Vps4bP46467 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vps4bP46467 Gm37795-201ENSMUST00000194216 2459 ntBASIC13.72□□□□□ -0.21
Vps4bP46467 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Vps4bP46467 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
Vps4bP46467 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vps4bP46467 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Vps4bP46467 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vps4bP46467 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Vps4bP46467 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC13.72□□□□□ -0.21
Vps4bP46467 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC13.72□□□□□ -0.21
Vps4bP46467 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Vps4bP46467 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Vps4bP46467 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC13.72□□□□□ -0.21
Vps4bP46467 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC13.72□□□□□ -0.21
Vps4bP46467 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC13.72□□□□□ -0.21
Vps4bP46467 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Vps4bP46467 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Vps4bP46467 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Vps4bP46467 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vps4bP46467 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vps4bP46467 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vps4bP46467 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Vps4bP46467 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Vps4bP46467 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vps4bP46467 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vps4bP46467 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Vps4bP46467 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Vps4bP46467 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Vps4bP46467 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Vps4bP46467 Gm42928-201ENSMUST00000197338 3339 ntBASIC13.71□□□□□ -0.21
Vps4bP46467 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC13.71□□□□□ -0.21
Vps4bP46467 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC13.71□□□□□ -0.21
Vps4bP46467 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Vps4bP46467 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Vps4bP46467 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Vps4bP46467 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC13.71□□□□□ -0.21
Vps4bP46467 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Vps4bP46467 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Vps4bP46467 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Vps4bP46467 Gm15770-201ENSMUST00000117498 584 ntBASIC13.71□□□□□ -0.21
Vps4bP46467 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
Vps4bP46467 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Vps4bP46467 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Vps4bP46467 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC13.71□□□□□ -0.21
Vps4bP46467 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Vps4bP46467 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC13.71□□□□□ -0.21
Vps4bP46467 Rbfox2-208ENSMUST00000227930 1218 ntBASIC13.71□□□□□ -0.21
Vps4bP46467 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Vps4bP46467 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Vps4bP46467 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Vps4bP46467 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Vps4bP46467 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Vps4bP46467 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Vps4bP46467 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Vps4bP46467 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
Vps4bP46467 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Vps4bP46467 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Vps4bP46467 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Vps4bP46467 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC13.71□□□□□ -0.22
Vps4bP46467 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Vps4bP46467 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Vps4bP46467 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
Vps4bP46467 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Vps4bP46467 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Vps4bP46467 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC13.7□□□□□ -0.22
Vps4bP46467 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Vps4bP46467 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vps4bP46467 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Vps4bP46467 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vps4bP46467 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vps4bP46467 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Vps4bP46467 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC13.7□□□□□ -0.22
Vps4bP46467 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vps4bP46467 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vps4bP46467 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vps4bP46467 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC13.7□□□□□ -0.22
Vps4bP46467 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vps4bP46467 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vps4bP46467 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vps4bP46467 Gm14127-201ENSMUST00000117906 678 ntBASIC13.7□□□□□ -0.22
Vps4bP46467 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Vps4bP46467 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Vps4bP46467 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Vps4bP46467 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Vps4bP46467 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC13.7□□□□□ -0.22
Vps4bP46467 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Vps4bP46467 Gm27618-201ENSMUST00000183671 60 ntBASIC13.7□□□□□ -0.22
Vps4bP46467 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Vps4bP46467 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Vps4bP46467 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC13.7□□□□□ -0.22
Vps4bP46467 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vps4bP46467 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Vps4bP46467 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC13.7□□□□□ -0.22
Vps4bP46467 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms