Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Cdx2P43241 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC12.79□□□□□ -0.36
Cdx2P43241 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cdx2P43241 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC12.79□□□□□ -0.36
Cdx2P43241 Gm8793-201ENSMUST00000183069 1303 ntBASIC12.79□□□□□ -0.36
Cdx2P43241 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cdx2P43241 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cdx2P43241 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC12.79□□□□□ -0.36
Cdx2P43241 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cdx2P43241 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cdx2P43241 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cdx2P43241 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Cdx2P43241 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cdx2P43241 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Cdx2P43241 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Cdx2P43241 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cdx2P43241 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cdx2P43241 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
Cdx2P43241 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cdx2P43241 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cdx2P43241 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cdx2P43241 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cdx2P43241 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cdx2P43241 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cdx2P43241 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Cdx2P43241 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cdx2P43241 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cdx2P43241 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cdx2P43241 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cdx2P43241 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC12.78□□□□□ -0.36
Cdx2P43241 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
Cdx2P43241 Mospd4-201ENSMUST00000180618 576 ntBASIC12.78□□□□□ -0.36
Cdx2P43241 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cdx2P43241 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC12.78□□□□□ -0.36
Cdx2P43241 Gm7619-201ENSMUST00000210649 1282 ntBASIC12.78□□□□□ -0.36
Cdx2P43241 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cdx2P43241 Gm6082-201ENSMUST00000215204 454 ntBASIC12.78□□□□□ -0.36
Cdx2P43241 Gm19163-201ENSMUST00000223313 780 ntBASIC12.78□□□□□ -0.36
Cdx2P43241 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cdx2P43241 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC12.78□□□□□ -0.36
Cdx2P43241 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cdx2P43241 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC12.78□□□□□ -0.36
Cdx2P43241 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Cdx2P43241 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cdx2P43241 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cdx2P43241 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC12.78□□□□□ -0.36
Cdx2P43241 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cdx2P43241 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cdx2P43241 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cdx2P43241 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cdx2P43241 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cdx2P43241 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
Cdx2P43241 Gm44207-201ENSMUST00000204568 1424 ntBASIC12.78□□□□□ -0.36
Cdx2P43241 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cdx2P43241 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cdx2P43241 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC12.78□□□□□ -0.36
Cdx2P43241 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC12.78□□□□□ -0.36
Cdx2P43241 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Cdx2P43241 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cdx2P43241 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cdx2P43241 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cdx2P43241 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cdx2P43241 Gm38197-201ENSMUST00000192320 2122 ntBASIC12.77□□□□□ -0.36
Cdx2P43241 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cdx2P43241 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC12.77□□□□□ -0.36
Cdx2P43241 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cdx2P43241 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cdx2P43241 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cdx2P43241 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cdx2P43241 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cdx2P43241 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Cdx2P43241 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cdx2P43241 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
Cdx2P43241 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Cdx2P43241 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Cdx2P43241 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Cdx2P43241 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cdx2P43241 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Cdx2P43241 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cdx2P43241 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Cdx2P43241 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC12.77□□□□□ -0.37
Cdx2P43241 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Cdx2P43241 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Cdx2P43241 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cdx2P43241 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cdx2P43241 Gm43423-201ENSMUST00000198390 2094 ntBASIC12.77□□□□□ -0.37
Cdx2P43241 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cdx2P43241 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cdx2P43241 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC12.77□□□□□ -0.37
Cdx2P43241 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Cdx2P43241 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC12.77□□□□□ -0.37
Cdx2P43241 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cdx2P43241 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cdx2P43241 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cdx2P43241 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Cdx2P43241 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cdx2P43241 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Cdx2P43241 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cdx2P43241 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cdx2P43241 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms