Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Sox6P40645 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Sox6P40645 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Sox6P40645 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Sox6P40645 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Sox6P40645 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC12.7□□□□□ -0.38
Sox6P40645 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Sox6P40645 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sox6P40645 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Sox6P40645 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Sox6P40645 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC12.7□□□□□ -0.38
Sox6P40645 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Sox6P40645 AC159621.2-201ENSMUST00000223519 1326 ntBASIC12.7□□□□□ -0.38
Sox6P40645 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Sox6P40645 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Sox6P40645 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC12.7□□□□□ -0.38
Sox6P40645 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Sox6P40645 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sox6P40645 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sox6P40645 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC12.7□□□□□ -0.38
Sox6P40645 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Sox6P40645 Gm27533-201ENSMUST00000183800 152 ntBASIC12.7□□□□□ -0.38
Sox6P40645 Gm17837-201ENSMUST00000186435 985 ntBASIC12.7□□□□□ -0.38
Sox6P40645 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC12.7□□□□□ -0.38
Sox6P40645 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC12.7□□□□□ -0.38
Sox6P40645 Gm16476-201ENSMUST00000221544 139 ntBASIC12.7□□□□□ -0.38
Sox6P40645 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sox6P40645 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sox6P40645 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sox6P40645 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC12.7□□□□□ -0.38
Sox6P40645 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC12.7□□□□□ -0.38
Sox6P40645 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sox6P40645 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sox6P40645 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sox6P40645 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sox6P40645 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sox6P40645 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC12.7□□□□□ -0.38
Sox6P40645 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Sox6P40645 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC12.7□□□□□ -0.38
Sox6P40645 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC12.7□□□□□ -0.38
Sox6P40645 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Sox6P40645 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sox6P40645 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Sox6P40645 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sox6P40645 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sox6P40645 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Sox6P40645 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sox6P40645 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sox6P40645 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Sox6P40645 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Sox6P40645 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Sox6P40645 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sox6P40645 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Sox6P40645 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC12.69□□□□□ -0.38
Sox6P40645 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC12.69□□□□□ -0.38
Sox6P40645 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sox6P40645 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Sox6P40645 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Sox6P40645 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Sox6P40645 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC12.69□□□□□ -0.38
Sox6P40645 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sox6P40645 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sox6P40645 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sox6P40645 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sox6P40645 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sox6P40645 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sox6P40645 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC12.69□□□□□ -0.38
Sox6P40645 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC12.69□□□□□ -0.38
Sox6P40645 Gm15653-201ENSMUST00000119247 907 ntBASIC12.69□□□□□ -0.38
Sox6P40645 Gm14767-201ENSMUST00000121559 586 ntBASIC12.69□□□□□ -0.38
Sox6P40645 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sox6P40645 Gm27618-201ENSMUST00000183671 60 ntBASIC12.69□□□□□ -0.38
Sox6P40645 Gm37277-201ENSMUST00000194052 1111 ntBASIC12.69□□□□□ -0.38
Sox6P40645 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC12.69□□□□□ -0.38
Sox6P40645 Gm6888-201ENSMUST00000221983 706 ntBASIC12.69□□□□□ -0.38
Sox6P40645 AC121804.3-201ENSMUST00000223420 295 ntBASIC12.69□□□□□ -0.38
Sox6P40645 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Sox6P40645 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sox6P40645 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Sox6P40645 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sox6P40645 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Sox6P40645 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Sox6P40645 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sox6P40645 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sox6P40645 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sox6P40645 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sox6P40645 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Sox6P40645 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Sox6P40645 AC164107.1-201ENSMUST00000227730 2161 ntBASIC12.69□□□□□ -0.38
Sox6P40645 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Sox6P40645 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Sox6P40645 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC12.68□□□□□ -0.38
Sox6P40645 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC12.68□□□□□ -0.38
Sox6P40645 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC12.68□□□□□ -0.38
Sox6P40645 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Sox6P40645 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sox6P40645 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC12.68□□□□□ -0.38
Sox6P40645 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Sox6P40645 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Sox6P40645 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms