Protein–RNA interactions for Protein: P39749

Fen1, Flap endonuclease 1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fen1P39749 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC13.6□□□□□ -0.23
Fen1P39749 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Fen1P39749 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Fen1P39749 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Fen1P39749 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Fen1P39749 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Fen1P39749 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Fen1P39749 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Fen1P39749 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Fen1P39749 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Fen1P39749 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Fen1P39749 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Fen1P39749 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Fen1P39749 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Fen1P39749 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Fen1P39749 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Fen1P39749 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC13.59□□□□□ -0.23
Fen1P39749 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Fen1P39749 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Fen1P39749 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Fen1P39749 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Fen1P39749 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Fen1P39749 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Fen1P39749 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC13.59□□□□□ -0.23
Fen1P39749 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Fen1P39749 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Fen1P39749 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Fen1P39749 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Fen1P39749 Gm14701-201ENSMUST00000117156 348 ntBASIC13.59□□□□□ -0.23
Fen1P39749 Gm2810-201ENSMUST00000118681 990 ntBASIC13.59□□□□□ -0.23
Fen1P39749 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
Fen1P39749 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Fen1P39749 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC13.59□□□□□ -0.23
Fen1P39749 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC13.59□□□□□ -0.23
Fen1P39749 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC13.59□□□□□ -0.23
Fen1P39749 AC149588.3-201ENSMUST00000227515 150 ntBASIC13.59□□□□□ -0.23
Fen1P39749 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Fen1P39749 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Fen1P39749 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC13.59□□□□□ -0.23
Fen1P39749 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Fen1P39749 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Fen1P39749 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Fen1P39749 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Fen1P39749 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Fen1P39749 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Fen1P39749 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
Fen1P39749 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Fen1P39749 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Fen1P39749 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Fen1P39749 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Fen1P39749 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Fen1P39749 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Fen1P39749 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Fen1P39749 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Fen1P39749 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC13.58□□□□□ -0.23
Fen1P39749 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Fen1P39749 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Fen1P39749 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC13.58□□□□□ -0.24
Fen1P39749 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Fen1P39749 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Fen1P39749 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC13.58□□□□□ -0.24
Fen1P39749 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC13.58□□□□□ -0.24
Fen1P39749 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC13.58□□□□□ -0.24
Fen1P39749 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Fen1P39749 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Fen1P39749 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Fen1P39749 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC13.58□□□□□ -0.24
Fen1P39749 Gm18027-201ENSMUST00000218947 619 ntBASIC13.58□□□□□ -0.24
Fen1P39749 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Fen1P39749 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Fen1P39749 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC13.58□□□□□ -0.24
Fen1P39749 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Fen1P39749 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Fen1P39749 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Fen1P39749 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Fen1P39749 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Fen1P39749 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Fen1P39749 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Fen1P39749 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Fen1P39749 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Fen1P39749 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Fen1P39749 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Fen1P39749 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Fen1P39749 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Fen1P39749 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Fen1P39749 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Fen1P39749 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Fen1P39749 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
Fen1P39749 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Fen1P39749 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Fen1P39749 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Fen1P39749 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Fen1P39749 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Fen1P39749 Gm8337-201ENSMUST00000187358 1938 ntBASIC13.57□□□□□ -0.24
Fen1P39749 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Fen1P39749 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Fen1P39749 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Fen1P39749 AA619741-201ENSMUST00000195095 646 ntBASIC13.57□□□□□ -0.24
Fen1P39749 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC13.57□□□□□ -0.24
Fen1P39749 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC13.57□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms