Protein–RNA interactions for Protein: P10146

Ccl1, C-C motif chemokine 1, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl1P10146 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC10.46□□□□□ -0.73
Ccl1P10146 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Ccl1P10146 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Ccl1P10146 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC10.46□□□□□ -0.73
Ccl1P10146 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC10.46□□□□□ -0.73
Ccl1P10146 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Ccl1P10146 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.73
Ccl1P10146 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
Ccl1P10146 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Ccl1P10146 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Ccl1P10146 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC10.46□□□□□ -0.73
Ccl1P10146 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC10.46□□□□□ -0.73
Ccl1P10146 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC10.46□□□□□ -0.73
Ccl1P10146 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC10.46□□□□□ -0.73
Ccl1P10146 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Ccl1P10146 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC10.46□□□□□ -0.73
Ccl1P10146 Gm27920-201ENSMUST00000183953 96 ntBASIC10.46□□□□□ -0.73
Ccl1P10146 Mir7036b-201ENSMUST00000184791 63 ntBASIC10.46□□□□□ -0.73
Ccl1P10146 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC10.46□□□□□ -0.73
Ccl1P10146 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC10.46□□□□□ -0.73
Ccl1P10146 Gm29741-201ENSMUST00000192667 421 ntBASIC10.46□□□□□ -0.73
Ccl1P10146 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC10.46□□□□□ -0.73
Ccl1P10146 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC10.46□□□□□ -0.73
Ccl1P10146 Gm18669-201ENSMUST00000216049 778 ntBASIC10.46□□□□□ -0.73
Ccl1P10146 AC139350.3-201ENSMUST00000226151 420 ntBASIC10.46□□□□□ -0.73
Ccl1P10146 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.73
Ccl1P10146 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Ccl1P10146 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Ccl1P10146 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Ccl1P10146 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Ccl1P10146 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC10.46□□□□□ -0.74
Ccl1P10146 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.74
Ccl1P10146 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Ccl1P10146 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Ccl1P10146 Gm5385-201ENSMUST00000118988 1559 ntBASIC10.46□□□□□ -0.74
Ccl1P10146 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Ccl1P10146 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.74
Ccl1P10146 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC10.46□□□□□ -0.74
Ccl1P10146 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.74
Ccl1P10146 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Ccl1P10146 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Ccl1P10146 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Ccl1P10146 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.74
Ccl1P10146 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Ccl1P10146 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Ccl1P10146 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC10.46□□□□□ -0.74
Ccl1P10146 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Ccl1P10146 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
Ccl1P10146 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Ccl1P10146 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Ccl1P10146 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Ccl1P10146 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Ccl1P10146 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
Ccl1P10146 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC10.45□□□□□ -0.74
Ccl1P10146 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Ccl1P10146 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Ccl1P10146 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
Ccl1P10146 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Ccl1P10146 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Ccl1P10146 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Ccl1P10146 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Ccl1P10146 Gm37472-201ENSMUST00000192342 4052 ntBASIC10.45□□□□□ -0.74
Ccl1P10146 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC10.45□□□□□ -0.74
Ccl1P10146 Gm9385-201ENSMUST00000117563 472 ntBASIC10.45□□□□□ -0.74
Ccl1P10146 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Ccl1P10146 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Ccl1P10146 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC10.45□□□□□ -0.74
Ccl1P10146 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC10.45□□□□□ -0.74
Ccl1P10146 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC10.45□□□□□ -0.74
Ccl1P10146 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Ccl1P10146 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
Ccl1P10146 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Ccl1P10146 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Ccl1P10146 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Ccl1P10146 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
Ccl1P10146 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC10.45□□□□□ -0.74
Ccl1P10146 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Ccl1P10146 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Ccl1P10146 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Ccl1P10146 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Ccl1P10146 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Ccl1P10146 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Ccl1P10146 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Ccl1P10146 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Ccl1P10146 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Ccl1P10146 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Ccl1P10146 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC10.45□□□□□ -0.74
Ccl1P10146 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Ccl1P10146 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC10.44□□□□□ -0.74
Ccl1P10146 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Ccl1P10146 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Ccl1P10146 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Ccl1P10146 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Ccl1P10146 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Ccl1P10146 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
Ccl1P10146 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Ccl1P10146 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Ccl1P10146 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC10.44□□□□□ -0.74
Ccl1P10146 Paupar-201ENSMUST00000194826 3482 ntBASIC10.44□□□□□ -0.74
Ccl1P10146 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms