Protein–RNA interactions for Protein: P03953

Cfd, Complement factor D, mousemouse

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CfdP03953 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CfdP03953 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CfdP03953 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CfdP03953 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
CfdP03953 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CfdP03953 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CfdP03953 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CfdP03953 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CfdP03953 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CfdP03953 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
CfdP03953 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
CfdP03953 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC11.28□□□□□ -0.6
CfdP03953 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
CfdP03953 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CfdP03953 Gm6226-201ENSMUST00000117765 1146 ntBASIC11.28□□□□□ -0.6
CfdP03953 Gm12350-201ENSMUST00000121208 462 ntBASIC11.28□□□□□ -0.6
CfdP03953 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC11.28□□□□□ -0.6
CfdP03953 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
CfdP03953 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC11.28□□□□□ -0.6
CfdP03953 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC11.28□□□□□ -0.6
CfdP03953 Gm44945-201ENSMUST00000206764 1187 ntBASIC11.28□□□□□ -0.6
CfdP03953 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC11.28□□□□□ -0.6
CfdP03953 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
CfdP03953 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CfdP03953 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
CfdP03953 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CfdP03953 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
CfdP03953 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC11.28□□□□□ -0.6
CfdP03953 Gm43273-201ENSMUST00000199649 2594 ntBASIC11.28□□□□□ -0.6
CfdP03953 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CfdP03953 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CfdP03953 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CfdP03953 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
CfdP03953 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC11.28□□□□□ -0.6
CfdP03953 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC11.28□□□□□ -0.6
CfdP03953 Zfp125-201ENSMUST00000079237 2488 ntBASIC11.28□□□□□ -0.6
CfdP03953 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CfdP03953 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
CfdP03953 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CfdP03953 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CfdP03953 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
CfdP03953 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
CfdP03953 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC11.28□□□□□ -0.6
CfdP03953 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.6
CfdP03953 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
CfdP03953 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC11.27□□□□□ -0.6
CfdP03953 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
CfdP03953 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC11.27□□□□□ -0.6
CfdP03953 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
CfdP03953 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
CfdP03953 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
CfdP03953 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
CfdP03953 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
CfdP03953 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
CfdP03953 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
CfdP03953 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
CfdP03953 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
CfdP03953 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
CfdP03953 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
CfdP03953 Gm6222-201ENSMUST00000120787 396 ntBASIC11.27□□□□□ -0.61
CfdP03953 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC11.27□□□□□ -0.61
CfdP03953 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
CfdP03953 Ighv1-51-201ENSMUST00000192903 354 ntBASIC11.27□□□□□ -0.61
CfdP03953 Gm44492-201ENSMUST00000197012 141 ntBASIC11.27□□□□□ -0.61
CfdP03953 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC11.27□□□□□ -0.61
CfdP03953 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC11.27□□□□□ -0.61
CfdP03953 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC11.27□□□□□ -0.61
CfdP03953 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
CfdP03953 AC154222.1-201ENSMUST00000223882 475 ntBASIC11.27□□□□□ -0.61
CfdP03953 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC11.27□□□□□ -0.61
CfdP03953 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
CfdP03953 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
CfdP03953 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC11.27□□□□□ -0.61
CfdP03953 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
CfdP03953 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC11.27□□□□□ -0.61
CfdP03953 Gm45667-201ENSMUST00000210380 1316 ntBASIC11.27□□□□□ -0.61
CfdP03953 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
CfdP03953 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC11.27□□□□□ -0.61
CfdP03953 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
CfdP03953 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
CfdP03953 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
CfdP03953 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
CfdP03953 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
CfdP03953 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
CfdP03953 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC11.27□□□□□ -0.61
CfdP03953 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
CfdP03953 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
CfdP03953 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
CfdP03953 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
CfdP03953 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
CfdP03953 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
CfdP03953 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
CfdP03953 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
CfdP03953 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
CfdP03953 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
CfdP03953 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
CfdP03953 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
CfdP03953 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
CfdP03953 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
CfdP03953 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 54.9 ms