Protein–RNA interactions for Protein: O88696

Clpp, ATP-dependent Clp protease proteolytic subunit, mitochondrial, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClppO88696 Gm7002-201ENSMUST00000221386 2165 ntBASIC13.25□□□□□ -0.29
ClppO88696 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
ClppO88696 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
ClppO88696 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ClppO88696 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
ClppO88696 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
ClppO88696 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
ClppO88696 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
ClppO88696 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ClppO88696 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ClppO88696 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC13.25□□□□□ -0.29
ClppO88696 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
ClppO88696 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
ClppO88696 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC13.25□□□□□ -0.29
ClppO88696 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
ClppO88696 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC13.25□□□□□ -0.29
ClppO88696 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
ClppO88696 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ClppO88696 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
ClppO88696 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC13.25□□□□□ -0.29
ClppO88696 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
ClppO88696 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ClppO88696 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ClppO88696 AC155252.1-201ENSMUST00000226462 1208 ntBASIC13.25□□□□□ -0.29
ClppO88696 AC149294.4-201ENSMUST00000227870 882 ntBASIC13.25□□□□□ -0.29
ClppO88696 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ClppO88696 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ClppO88696 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ClppO88696 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ClppO88696 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
ClppO88696 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
ClppO88696 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ClppO88696 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC13.25□□□□□ -0.29
ClppO88696 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
ClppO88696 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ClppO88696 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC13.25□□□□□ -0.29
ClppO88696 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
ClppO88696 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC13.25□□□□□ -0.29
ClppO88696 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ClppO88696 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
ClppO88696 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
ClppO88696 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
ClppO88696 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
ClppO88696 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
ClppO88696 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ClppO88696 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
ClppO88696 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ClppO88696 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
ClppO88696 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
ClppO88696 Rab3c-202ENSMUST00000223922 2398 ntBASIC13.24□□□□□ -0.29
ClppO88696 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ClppO88696 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
ClppO88696 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ClppO88696 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ClppO88696 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
ClppO88696 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
ClppO88696 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
ClppO88696 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC13.24□□□□□ -0.29
ClppO88696 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ClppO88696 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC13.24□□□□□ -0.29
ClppO88696 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
ClppO88696 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
ClppO88696 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC13.24□□□□□ -0.29
ClppO88696 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC13.24□□□□□ -0.29
ClppO88696 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC13.24□□□□□ -0.29
ClppO88696 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ClppO88696 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC13.24□□□□□ -0.29
ClppO88696 Gm28911-201ENSMUST00000188837 117 ntBASIC13.24□□□□□ -0.29
ClppO88696 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
ClppO88696 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC13.24□□□□□ -0.29
ClppO88696 Gm45059-201ENSMUST00000205558 1077 ntBASIC13.24□□□□□ -0.29
ClppO88696 Gm18307-201ENSMUST00000206864 949 ntBASIC13.24□□□□□ -0.29
ClppO88696 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
ClppO88696 Gm9544-201ENSMUST00000223349 2482 ntBASIC13.24□□□□□ -0.29
ClppO88696 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
ClppO88696 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
ClppO88696 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
ClppO88696 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
ClppO88696 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
ClppO88696 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC13.24□□□□□ -0.29
ClppO88696 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
ClppO88696 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
ClppO88696 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
ClppO88696 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ClppO88696 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
ClppO88696 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ClppO88696 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ClppO88696 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
ClppO88696 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
ClppO88696 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
ClppO88696 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ClppO88696 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ClppO88696 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ClppO88696 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ClppO88696 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
ClppO88696 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
ClppO88696 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ClppO88696 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC13.23□□□□□ -0.29
ClppO88696 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC13.23□□□□□ -0.29
ClppO88696 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC13.23□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms