Protein–RNA interactions for Protein: O54941

Smarce1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, mousemouse

Known RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarce1O54941 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Smarce1O54941 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Smarce1O54941 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Smarce1O54941 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Smarce1O54941 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Smarce1O54941 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Smarce1O54941 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC16.08■□□□□ 0.17
Smarce1O54941 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Smarce1O54941 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
Smarce1O54941 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Smarce1O54941 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Smarce1O54941 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC16.08■□□□□ 0.16
Smarce1O54941 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC16.08■□□□□ 0.16
Smarce1O54941 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Smarce1O54941 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Smarce1O54941 Gm3695-201ENSMUST00000087222 1009 ntBASIC16.08■□□□□ 0.16
Smarce1O54941 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Smarce1O54941 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Smarce1O54941 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Smarce1O54941 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Smarce1O54941 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Smarce1O54941 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Smarce1O54941 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC16.08■□□□□ 0.16
Smarce1O54941 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Smarce1O54941 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Smarce1O54941 Gm14452-201ENSMUST00000118680 1632 ntBASIC16.08■□□□□ 0.16
Smarce1O54941 Gm5939-201ENSMUST00000119613 2874 ntBASIC16.08■□□□□ 0.16
Smarce1O54941 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Smarce1O54941 Gm37861-201ENSMUST00000193534 2869 ntBASIC16.08■□□□□ 0.16
Smarce1O54941 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Smarce1O54941 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC16.08■□□□□ 0.16
Smarce1O54941 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Smarce1O54941 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Smarce1O54941 Gm43134-201ENSMUST00000199434 1886 ntBASIC16.08■□□□□ 0.16
Smarce1O54941 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Smarce1O54941 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Smarce1O54941 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC16.07■□□□□ 0.16
Smarce1O54941 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Smarce1O54941 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Smarce1O54941 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Smarce1O54941 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Smarce1O54941 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC16.07■□□□□ 0.16
Smarce1O54941 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Smarce1O54941 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC16.07■□□□□ 0.16
Smarce1O54941 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Smarce1O54941 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Smarce1O54941 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC16.07■□□□□ 0.16
Smarce1O54941 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC16.07■□□□□ 0.16
Smarce1O54941 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Smarce1O54941 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Smarce1O54941 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Smarce1O54941 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Smarce1O54941 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Smarce1O54941 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Smarce1O54941 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Smarce1O54941 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Smarce1O54941 Gm20632-201ENSMUST00000176760 2427 ntBASIC16.07■□□□□ 0.16
Smarce1O54941 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Smarce1O54941 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Smarce1O54941 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Smarce1O54941 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Smarce1O54941 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Smarce1O54941 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Smarce1O54941 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
Smarce1O54941 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Smarce1O54941 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Smarce1O54941 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Smarce1O54941 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Smarce1O54941 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Smarce1O54941 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Smarce1O54941 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Smarce1O54941 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Smarce1O54941 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC16.06■□□□□ 0.16
Smarce1O54941 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Smarce1O54941 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC16.06■□□□□ 0.16
Smarce1O54941 Gm5320-201ENSMUST00000207163 1519 ntBASIC16.06■□□□□ 0.16
Smarce1O54941 Tmed9-203ENSMUST00000224741 1450 ntBASIC16.06■□□□□ 0.16
Smarce1O54941 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Smarce1O54941 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Smarce1O54941 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Smarce1O54941 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Smarce1O54941 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC16.06■□□□□ 0.16
Smarce1O54941 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Smarce1O54941 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC16.06■□□□□ 0.16
Smarce1O54941 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC16.06■□□□□ 0.16
Smarce1O54941 Gm27430-201ENSMUST00000184585 107 ntBASIC16.06■□□□□ 0.16
Smarce1O54941 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC16.06■□□□□ 0.16
Smarce1O54941 Gm44333-201ENSMUST00000197168 107 ntBASIC16.06■□□□□ 0.16
Smarce1O54941 AC151286.1-201ENSMUST00000198489 145 ntBASIC16.06■□□□□ 0.16
Smarce1O54941 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Smarce1O54941 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Smarce1O54941 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Smarce1O54941 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Smarce1O54941 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Smarce1O54941 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Smarce1O54941 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Smarce1O54941 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Smarce1O54941 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Smarce1O54941 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Smarce1O54941 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC16.06■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 68.6 ms