Protein–RNA interactions for Protein: G3X8Y1

Trim55, MCG19772, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim55G3X8Y1 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trim55G3X8Y1 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC13.85□□□□□ -0.19
Trim55G3X8Y1 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trim55G3X8Y1 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC13.85□□□□□ -0.19
Trim55G3X8Y1 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC13.85□□□□□ -0.19
Trim55G3X8Y1 AC159301.1-201ENSMUST00000225130 1182 ntBASIC13.85□□□□□ -0.19
Trim55G3X8Y1 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC13.85□□□□□ -0.19
Trim55G3X8Y1 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC13.85□□□□□ -0.19
Trim55G3X8Y1 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trim55G3X8Y1 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim55G3X8Y1 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Trim55G3X8Y1 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim55G3X8Y1 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Trim55G3X8Y1 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim55G3X8Y1 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim55G3X8Y1 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim55G3X8Y1 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim55G3X8Y1 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trim55G3X8Y1 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim55G3X8Y1 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim55G3X8Y1 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim55G3X8Y1 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim55G3X8Y1 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim55G3X8Y1 Gm10176-201ENSMUST00000159707 2264 ntBASIC13.84□□□□□ -0.19
Trim55G3X8Y1 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim55G3X8Y1 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim55G3X8Y1 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trim55G3X8Y1 Map1b-203ENSMUST00000223725 2669 ntBASIC13.84□□□□□ -0.19
Trim55G3X8Y1 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim55G3X8Y1 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim55G3X8Y1 Gm7935-201ENSMUST00000100555 1278 ntBASIC13.84□□□□□ -0.19
Trim55G3X8Y1 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
Trim55G3X8Y1 Gm15165-201ENSMUST00000118140 502 ntBASIC13.84□□□□□ -0.19
Trim55G3X8Y1 Gm15593-201ENSMUST00000122085 1008 ntBASIC13.84□□□□□ -0.19
Trim55G3X8Y1 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trim55G3X8Y1 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim55G3X8Y1 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim55G3X8Y1 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Trim55G3X8Y1 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC13.84□□□□□ -0.19
Trim55G3X8Y1 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
Trim55G3X8Y1 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC13.84□□□□□ -0.19
Trim55G3X8Y1 Gm7506-201ENSMUST00000207758 815 ntBASIC13.84□□□□□ -0.19
Trim55G3X8Y1 Gm18636-201ENSMUST00000218846 1066 ntBASIC13.84□□□□□ -0.19
Trim55G3X8Y1 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC13.84□□□□□ -0.19
Trim55G3X8Y1 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim55G3X8Y1 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim55G3X8Y1 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim55G3X8Y1 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim55G3X8Y1 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim55G3X8Y1 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim55G3X8Y1 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trim55G3X8Y1 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim55G3X8Y1 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim55G3X8Y1 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim55G3X8Y1 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim55G3X8Y1 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trim55G3X8Y1 Gm5385-201ENSMUST00000118988 1559 ntBASIC13.83□□□□□ -0.19
Trim55G3X8Y1 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.19
Trim55G3X8Y1 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Trim55G3X8Y1 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Trim55G3X8Y1 Gm9252-201ENSMUST00000172364 1602 ntBASIC13.83□□□□□ -0.2
Trim55G3X8Y1 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim55G3X8Y1 AC131743.5-201ENSMUST00000220775 1618 ntBASIC13.83□□□□□ -0.2
Trim55G3X8Y1 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim55G3X8Y1 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trim55G3X8Y1 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim55G3X8Y1 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim55G3X8Y1 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim55G3X8Y1 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim55G3X8Y1 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim55G3X8Y1 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trim55G3X8Y1 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim55G3X8Y1 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trim55G3X8Y1 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC13.83□□□□□ -0.2
Trim55G3X8Y1 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
Trim55G3X8Y1 Gm11452-201ENSMUST00000122376 690 ntBASIC13.83□□□□□ -0.2
Trim55G3X8Y1 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trim55G3X8Y1 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trim55G3X8Y1 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC13.83□□□□□ -0.2
Trim55G3X8Y1 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC13.83□□□□□ -0.2
Trim55G3X8Y1 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trim55G3X8Y1 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC13.83□□□□□ -0.2
Trim55G3X8Y1 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim55G3X8Y1 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim55G3X8Y1 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim55G3X8Y1 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim55G3X8Y1 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim55G3X8Y1 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim55G3X8Y1 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC13.83□□□□□ -0.2
Trim55G3X8Y1 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Trim55G3X8Y1 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Trim55G3X8Y1 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim55G3X8Y1 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trim55G3X8Y1 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim55G3X8Y1 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim55G3X8Y1 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim55G3X8Y1 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim55G3X8Y1 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim55G3X8Y1 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC13.82□□□□□ -0.2
Trim55G3X8Y1 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 66.2 ms