Protein–RNA interactions for Protein: E9Q5G2

Pcdhb9, Protocadherin beta 9, mousemouse

Predictions only

Length 828 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb9E9Q5G2 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Pcdhb9E9Q5G2 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhb9E9Q5G2 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhb9E9Q5G2 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhb9E9Q5G2 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Pcdhb9E9Q5G2 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Pcdhb9E9Q5G2 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhb9E9Q5G2 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhb9E9Q5G2 Gm10327-201ENSMUST00000105222 1002 ntBASIC15.86■□□□□ 0.13
Pcdhb9E9Q5G2 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC15.86■□□□□ 0.13
Pcdhb9E9Q5G2 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC15.86■□□□□ 0.13
Pcdhb9E9Q5G2 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
Pcdhb9E9Q5G2 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC15.86■□□□□ 0.13
Pcdhb9E9Q5G2 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC15.86■□□□□ 0.13
Pcdhb9E9Q5G2 Gm43433-201ENSMUST00000196573 481 ntBASIC15.86■□□□□ 0.13
Pcdhb9E9Q5G2 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
Pcdhb9E9Q5G2 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhb9E9Q5G2 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Pcdhb9E9Q5G2 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhb9E9Q5G2 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhb9E9Q5G2 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhb9E9Q5G2 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC15.86■□□□□ 0.13
Pcdhb9E9Q5G2 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhb9E9Q5G2 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhb9E9Q5G2 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhb9E9Q5G2 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhb9E9Q5G2 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhb9E9Q5G2 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Pcdhb9E9Q5G2 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC15.86■□□□□ 0.13
Pcdhb9E9Q5G2 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdhb9E9Q5G2 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdhb9E9Q5G2 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdhb9E9Q5G2 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Pcdhb9E9Q5G2 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdhb9E9Q5G2 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdhb9E9Q5G2 Gm45779-201ENSMUST00000212189 4064 ntBASIC15.85■□□□□ 0.13
Pcdhb9E9Q5G2 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdhb9E9Q5G2 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdhb9E9Q5G2 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdhb9E9Q5G2 Gm14350-201ENSMUST00000116642 640 ntBASIC15.85■□□□□ 0.13
Pcdhb9E9Q5G2 Gm12390-201ENSMUST00000117897 397 ntBASIC15.85■□□□□ 0.13
Pcdhb9E9Q5G2 Gm13829-201ENSMUST00000119600 138 ntBASIC15.85■□□□□ 0.13
Pcdhb9E9Q5G2 Gm27847-201ENSMUST00000183711 107 ntBASIC15.85■□□□□ 0.13
Pcdhb9E9Q5G2 Gm27375-201ENSMUST00000183799 107 ntBASIC15.85■□□□□ 0.13
Pcdhb9E9Q5G2 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC15.85■□□□□ 0.13
Pcdhb9E9Q5G2 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC15.85■□□□□ 0.13
Pcdhb9E9Q5G2 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdhb9E9Q5G2 AC173210.1-201ENSMUST00000222341 1131 ntBASIC15.85■□□□□ 0.13
Pcdhb9E9Q5G2 AC154595.3-201ENSMUST00000224579 384 ntBASIC15.85■□□□□ 0.13
Pcdhb9E9Q5G2 Gm6091-201ENSMUST00000098307 165 ntBASIC15.85■□□□□ 0.13
Pcdhb9E9Q5G2 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdhb9E9Q5G2 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdhb9E9Q5G2 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdhb9E9Q5G2 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdhb9E9Q5G2 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdhb9E9Q5G2 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Pcdhb9E9Q5G2 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdhb9E9Q5G2 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdhb9E9Q5G2 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdhb9E9Q5G2 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Pcdhb9E9Q5G2 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC15.85■□□□□ 0.13
Pcdhb9E9Q5G2 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC15.85■□□□□ 0.13
Pcdhb9E9Q5G2 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC15.85■□□□□ 0.13
Pcdhb9E9Q5G2 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Pcdhb9E9Q5G2 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhb9E9Q5G2 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhb9E9Q5G2 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhb9E9Q5G2 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhb9E9Q5G2 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Pcdhb9E9Q5G2 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhb9E9Q5G2 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC15.84■□□□□ 0.13
Pcdhb9E9Q5G2 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhb9E9Q5G2 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhb9E9Q5G2 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhb9E9Q5G2 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhb9E9Q5G2 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhb9E9Q5G2 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhb9E9Q5G2 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhb9E9Q5G2 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhb9E9Q5G2 Gm8810-201ENSMUST00000172895 754 ntBASIC15.84■□□□□ 0.13
Pcdhb9E9Q5G2 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
Pcdhb9E9Q5G2 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhb9E9Q5G2 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhb9E9Q5G2 Gm6266-201ENSMUST00000203844 806 ntBASIC15.84■□□□□ 0.13
Pcdhb9E9Q5G2 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Pcdhb9E9Q5G2 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Pcdhb9E9Q5G2 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhb9E9Q5G2 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhb9E9Q5G2 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhb9E9Q5G2 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC15.84■□□□□ 0.13
Pcdhb9E9Q5G2 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhb9E9Q5G2 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhb9E9Q5G2 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhb9E9Q5G2 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhb9E9Q5G2 Gm44291-201ENSMUST00000203102 2865 ntBASIC15.84■□□□□ 0.13
Pcdhb9E9Q5G2 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhb9E9Q5G2 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhb9E9Q5G2 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhb9E9Q5G2 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Pcdhb9E9Q5G2 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC15.83■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 67 ms