Protein–RNA interactions for Protein: D3YXL0

Ccdc170, Coiled-coil domain-containing 170, mousemouse

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc170D3YXL0 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc170D3YXL0 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc170D3YXL0 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
Ccdc170D3YXL0 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc170D3YXL0 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc170D3YXL0 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc170D3YXL0 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc170D3YXL0 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc170D3YXL0 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc170D3YXL0 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC14.04□□□□□ -0.16
Ccdc170D3YXL0 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc170D3YXL0 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc170D3YXL0 Gm28386-201ENSMUST00000189147 1849 ntBASIC14.04□□□□□ -0.16
Ccdc170D3YXL0 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc170D3YXL0 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc170D3YXL0 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Ccdc170D3YXL0 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc170D3YXL0 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc170D3YXL0 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc170D3YXL0 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC14.04□□□□□ -0.16
Ccdc170D3YXL0 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Ccdc170D3YXL0 Gm11779-201ENSMUST00000118541 368 ntBASIC14.04□□□□□ -0.16
Ccdc170D3YXL0 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc170D3YXL0 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC14.04□□□□□ -0.16
Ccdc170D3YXL0 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC14.04□□□□□ -0.16
Ccdc170D3YXL0 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc170D3YXL0 Gm6916-202ENSMUST00000205523 195 ntBASIC14.04□□□□□ -0.16
Ccdc170D3YXL0 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc170D3YXL0 AC133598.3-202ENSMUST00000224219 531 ntBASIC14.04□□□□□ -0.16
Ccdc170D3YXL0 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc170D3YXL0 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc170D3YXL0 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc170D3YXL0 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc170D3YXL0 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc170D3YXL0 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Ccdc170D3YXL0 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc170D3YXL0 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC14.04□□□□□ -0.16
Ccdc170D3YXL0 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc170D3YXL0 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc170D3YXL0 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc170D3YXL0 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc170D3YXL0 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC14.04□□□□□ -0.16
Ccdc170D3YXL0 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc170D3YXL0 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc170D3YXL0 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc170D3YXL0 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc170D3YXL0 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc170D3YXL0 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc170D3YXL0 AC154725.1-201ENSMUST00000224826 1961 ntBASIC14.03□□□□□ -0.16
Ccdc170D3YXL0 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc170D3YXL0 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc170D3YXL0 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Ccdc170D3YXL0 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Ccdc170D3YXL0 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc170D3YXL0 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc170D3YXL0 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
Ccdc170D3YXL0 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc170D3YXL0 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc170D3YXL0 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc170D3YXL0 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
Ccdc170D3YXL0 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC14.03□□□□□ -0.16
Ccdc170D3YXL0 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC14.03□□□□□ -0.16
Ccdc170D3YXL0 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Ccdc170D3YXL0 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC14.03□□□□□ -0.16
Ccdc170D3YXL0 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC14.03□□□□□ -0.16
Ccdc170D3YXL0 Dupd1-202ENSMUST00000224735 548 ntBASIC14.03□□□□□ -0.16
Ccdc170D3YXL0 AC124549.3-201ENSMUST00000225541 367 ntBASIC14.03□□□□□ -0.16
Ccdc170D3YXL0 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc170D3YXL0 Gm15500-202ENSMUST00000071641 1019 ntBASIC14.03□□□□□ -0.16
Ccdc170D3YXL0 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Ccdc170D3YXL0 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc170D3YXL0 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc170D3YXL0 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Ccdc170D3YXL0 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Ccdc170D3YXL0 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC14.03□□□□□ -0.16
Ccdc170D3YXL0 Gm38355-201ENSMUST00000192514 1570 ntBASIC14.03□□□□□ -0.16
Ccdc170D3YXL0 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Ccdc170D3YXL0 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc170D3YXL0 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc170D3YXL0 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Ccdc170D3YXL0 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc170D3YXL0 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
Ccdc170D3YXL0 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Ccdc170D3YXL0 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc170D3YXL0 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ccdc170D3YXL0 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Ccdc170D3YXL0 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ccdc170D3YXL0 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ccdc170D3YXL0 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ccdc170D3YXL0 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Ccdc170D3YXL0 AC238940.1-201ENSMUST00000225106 1858 ntBASIC14.02□□□□□ -0.16
Ccdc170D3YXL0 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ccdc170D3YXL0 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ccdc170D3YXL0 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
Ccdc170D3YXL0 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc170D3YXL0 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc170D3YXL0 H2af-ps-201ENSMUST00000119066 295 ntBASIC14.02□□□□□ -0.17
Ccdc170D3YXL0 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC14.02□□□□□ -0.17
Ccdc170D3YXL0 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC14.02□□□□□ -0.17
Ccdc170D3YXL0 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms