Protein–RNA interactions for Protein: B9EKI3

Tmf1, TATA element modulatory factor, mousemouse

Predictions only

Length 1,091 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmf1B9EKI3 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Tmf1B9EKI3 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Tmf1B9EKI3 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Tmf1B9EKI3 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Tmf1B9EKI3 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Tmf1B9EKI3 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Tmf1B9EKI3 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC18.25■□□□□ 0.51
Tmf1B9EKI3 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC18.25■□□□□ 0.51
Tmf1B9EKI3 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Tmf1B9EKI3 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Tmf1B9EKI3 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Tmf1B9EKI3 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Tmf1B9EKI3 AC154725.1-201ENSMUST00000224826 1961 ntBASIC18.24■□□□□ 0.51
Tmf1B9EKI3 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Tmf1B9EKI3 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Tmf1B9EKI3 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC18.24■□□□□ 0.51
Tmf1B9EKI3 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Tmf1B9EKI3 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Tmf1B9EKI3 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Tmf1B9EKI3 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Tmf1B9EKI3 Proscos-202ENSMUST00000178990 666 ntBASIC18.24■□□□□ 0.51
Tmf1B9EKI3 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Tmf1B9EKI3 Gm45841-201ENSMUST00000207700 164 ntBASIC18.24■□□□□ 0.51
Tmf1B9EKI3 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Tmf1B9EKI3 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC18.24■□□□□ 0.51
Tmf1B9EKI3 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Tmf1B9EKI3 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Tmf1B9EKI3 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Tmf1B9EKI3 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Tmf1B9EKI3 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Tmf1B9EKI3 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Tmf1B9EKI3 Gm19863-201ENSMUST00000192480 2218 ntBASIC18.24■□□□□ 0.51
Tmf1B9EKI3 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC18.24■□□□□ 0.51
Tmf1B9EKI3 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Tmf1B9EKI3 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Tmf1B9EKI3 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Tmf1B9EKI3 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Tmf1B9EKI3 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Tmf1B9EKI3 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC18.24■□□□□ 0.51
Tmf1B9EKI3 AC096628.2-201ENSMUST00000225443 1413 ntBASIC18.23■□□□□ 0.51
Tmf1B9EKI3 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Tmf1B9EKI3 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Tmf1B9EKI3 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Tmf1B9EKI3 Gm12500-202ENSMUST00000186471 2428 ntBASIC18.23■□□□□ 0.51
Tmf1B9EKI3 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Tmf1B9EKI3 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC18.23■□□□□ 0.51
Tmf1B9EKI3 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Tmf1B9EKI3 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Tmf1B9EKI3 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Tmf1B9EKI3 Abhd6-203ENSMUST00000225234 1958 ntBASIC18.23■□□□□ 0.51
Tmf1B9EKI3 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Tmf1B9EKI3 Gm12742-201ENSMUST00000117326 410 ntBASIC18.23■□□□□ 0.51
Tmf1B9EKI3 Gm9124-201ENSMUST00000191789 1092 ntBASIC18.23■□□□□ 0.51
Tmf1B9EKI3 Gm9113-201ENSMUST00000192510 1018 ntBASIC18.23■□□□□ 0.51
Tmf1B9EKI3 Gm9131-201ENSMUST00000193557 1089 ntBASIC18.23■□□□□ 0.51
Tmf1B9EKI3 Gm9121-201ENSMUST00000193749 1071 ntBASIC18.23■□□□□ 0.51
Tmf1B9EKI3 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Tmf1B9EKI3 AC154595.3-201ENSMUST00000224579 384 ntBASIC18.23■□□□□ 0.51
Tmf1B9EKI3 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Tmf1B9EKI3 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Tmf1B9EKI3 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC18.23■□□□□ 0.51
Tmf1B9EKI3 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Tmf1B9EKI3 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC18.23■□□□□ 0.51
Tmf1B9EKI3 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Tmf1B9EKI3 Gm4782-201ENSMUST00000168705 2046 ntBASIC18.23■□□□□ 0.51
Tmf1B9EKI3 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Tmf1B9EKI3 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Tmf1B9EKI3 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Tmf1B9EKI3 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Tmf1B9EKI3 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Tmf1B9EKI3 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Tmf1B9EKI3 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Tmf1B9EKI3 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Tmf1B9EKI3 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC18.22■□□□□ 0.51
Tmf1B9EKI3 Gm43399-201ENSMUST00000202546 2374 ntBASIC18.22■□□□□ 0.51
Tmf1B9EKI3 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Tmf1B9EKI3 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC18.22■□□□□ 0.51
Tmf1B9EKI3 Gm4984-201ENSMUST00000115987 360 ntBASIC18.22■□□□□ 0.51
Tmf1B9EKI3 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Tmf1B9EKI3 Gm10156-201ENSMUST00000122364 462 ntBASIC18.22■□□□□ 0.51
Tmf1B9EKI3 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC18.22■□□□□ 0.51
Tmf1B9EKI3 Gm7561-201ENSMUST00000211203 886 ntBASIC18.22■□□□□ 0.51
Tmf1B9EKI3 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Tmf1B9EKI3 AC166349.1-201ENSMUST00000220866 695 ntBASIC18.22■□□□□ 0.51
Tmf1B9EKI3 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Tmf1B9EKI3 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Tmf1B9EKI3 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Tmf1B9EKI3 Gm15544-201ENSMUST00000118776 1531 ntBASIC18.22■□□□□ 0.51
Tmf1B9EKI3 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Tmf1B9EKI3 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Tmf1B9EKI3 Gm13050-201ENSMUST00000122149 1345 ntBASIC18.22■□□□□ 0.51
Tmf1B9EKI3 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Tmf1B9EKI3 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Tmf1B9EKI3 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Tmf1B9EKI3 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Tmf1B9EKI3 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Tmf1B9EKI3 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC18.21■□□□□ 0.51
Tmf1B9EKI3 Gm18630-201ENSMUST00000222109 1397 ntBASIC18.21■□□□□ 0.51
Tmf1B9EKI3 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Tmf1B9EKI3 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms