Protein–RNA interactions for Protein: B1AR17

Chd3, Chromodomain helicase DNA-binding protein 3, mousemouse

Predictions only

Length 2,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd3B1AR17 Dctn4-202ENSMUST00000223590 1530 ntBASIC13.21□□□□□ -0.29
Chd3B1AR17 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Chd3B1AR17 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
Chd3B1AR17 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Chd3B1AR17 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Chd3B1AR17 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.29
Chd3B1AR17 Gm13392-201ENSMUST00000117708 150 ntBASIC13.21□□□□□ -0.29
Chd3B1AR17 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Chd3B1AR17 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC13.21□□□□□ -0.29
Chd3B1AR17 Gm7561-201ENSMUST00000211203 886 ntBASIC13.21□□□□□ -0.29
Chd3B1AR17 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC13.21□□□□□ -0.29
Chd3B1AR17 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Chd3B1AR17 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Chd3B1AR17 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Chd3B1AR17 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Chd3B1AR17 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Chd3B1AR17 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Chd3B1AR17 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Chd3B1AR17 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Chd3B1AR17 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Chd3B1AR17 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Chd3B1AR17 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Chd3B1AR17 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC13.21□□□□□ -0.3
Chd3B1AR17 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC13.21□□□□□ -0.3
Chd3B1AR17 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Chd3B1AR17 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Chd3B1AR17 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC13.2□□□□□ -0.3
Chd3B1AR17 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Chd3B1AR17 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC13.2□□□□□ -0.3
Chd3B1AR17 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC13.2□□□□□ -0.3
Chd3B1AR17 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Chd3B1AR17 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Chd3B1AR17 Gm10478-201ENSMUST00000084451 396 ntBASIC13.2□□□□□ -0.3
Chd3B1AR17 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Chd3B1AR17 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Chd3B1AR17 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
Chd3B1AR17 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Chd3B1AR17 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Chd3B1AR17 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Chd3B1AR17 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Chd3B1AR17 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Chd3B1AR17 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Chd3B1AR17 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Chd3B1AR17 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Chd3B1AR17 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC13.2□□□□□ -0.3
Chd3B1AR17 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Chd3B1AR17 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC13.2□□□□□ -0.3
Chd3B1AR17 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Chd3B1AR17 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC13.2□□□□□ -0.3
Chd3B1AR17 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Chd3B1AR17 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Chd3B1AR17 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC13.2□□□□□ -0.3
Chd3B1AR17 Gm14752-201ENSMUST00000120719 2075 ntBASIC13.2□□□□□ -0.3
Chd3B1AR17 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Chd3B1AR17 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Chd3B1AR17 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Chd3B1AR17 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Chd3B1AR17 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC13.2□□□□□ -0.3
Chd3B1AR17 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC13.2□□□□□ -0.3
Chd3B1AR17 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Chd3B1AR17 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC13.2□□□□□ -0.3
Chd3B1AR17 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Chd3B1AR17 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Chd3B1AR17 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Chd3B1AR17 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Chd3B1AR17 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Chd3B1AR17 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Chd3B1AR17 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Chd3B1AR17 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Chd3B1AR17 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Chd3B1AR17 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Chd3B1AR17 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Chd3B1AR17 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Chd3B1AR17 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Chd3B1AR17 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Chd3B1AR17 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Chd3B1AR17 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Chd3B1AR17 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Chd3B1AR17 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Chd3B1AR17 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Chd3B1AR17 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC13.19□□□□□ -0.3
Chd3B1AR17 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Chd3B1AR17 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Chd3B1AR17 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Chd3B1AR17 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Chd3B1AR17 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Chd3B1AR17 AC139350.1-201ENSMUST00000227064 1594 ntBASIC13.19□□□□□ -0.3
Chd3B1AR17 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Chd3B1AR17 Gm13050-201ENSMUST00000122149 1345 ntBASIC13.19□□□□□ -0.3
Chd3B1AR17 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Chd3B1AR17 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Chd3B1AR17 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC13.19□□□□□ -0.3
Chd3B1AR17 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Chd3B1AR17 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Chd3B1AR17 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Chd3B1AR17 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Chd3B1AR17 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC13.19□□□□□ -0.3
Chd3B1AR17 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
Chd3B1AR17 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Chd3B1AR17 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 59.1 ms