Protein–RNA interactions for Protein: Q9ER42

Barx1, Homeobox protein BarH-like 1, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Barx1Q9ER42 Gm13342-201ENSMUST00000121055 207 ntBASIC12.24□□□□□ -0.45
Barx1Q9ER42 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Barx1Q9ER42 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Barx1Q9ER42 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Barx1Q9ER42 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC12.24□□□□□ -0.45
Barx1Q9ER42 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Barx1Q9ER42 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Barx1Q9ER42 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Barx1Q9ER42 Gm3809-201ENSMUST00000180973 1006 ntBASIC12.24□□□□□ -0.45
Barx1Q9ER42 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC12.24□□□□□ -0.45
Barx1Q9ER42 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Barx1Q9ER42 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC12.24□□□□□ -0.45
Barx1Q9ER42 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC12.24□□□□□ -0.45
Barx1Q9ER42 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Barx1Q9ER42 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Barx1Q9ER42 AC159196.2-201ENSMUST00000224082 1622 ntBASIC12.24□□□□□ -0.45
Barx1Q9ER42 AC140406.1-201ENSMUST00000226481 465 ntBASIC12.24□□□□□ -0.45
Barx1Q9ER42 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Barx1Q9ER42 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Barx1Q9ER42 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Barx1Q9ER42 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Barx1Q9ER42 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Barx1Q9ER42 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Barx1Q9ER42 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Barx1Q9ER42 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Barx1Q9ER42 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Barx1Q9ER42 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Barx1Q9ER42 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Barx1Q9ER42 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Barx1Q9ER42 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Barx1Q9ER42 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Barx1Q9ER42 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC12.23□□□□□ -0.45
Barx1Q9ER42 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC12.23□□□□□ -0.45
Barx1Q9ER42 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Barx1Q9ER42 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Barx1Q9ER42 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Barx1Q9ER42 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Barx1Q9ER42 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Barx1Q9ER42 Gm9347-201ENSMUST00000211473 1607 ntBASIC12.23□□□□□ -0.45
Barx1Q9ER42 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Barx1Q9ER42 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Barx1Q9ER42 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Barx1Q9ER42 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Barx1Q9ER42 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
Barx1Q9ER42 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC12.23□□□□□ -0.45
Barx1Q9ER42 Gm5687-201ENSMUST00000118252 640 ntBASIC12.23□□□□□ -0.45
Barx1Q9ER42 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
Barx1Q9ER42 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC12.23□□□□□ -0.45
Barx1Q9ER42 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC12.23□□□□□ -0.45
Barx1Q9ER42 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Barx1Q9ER42 Gm27501-201ENSMUST00000183599 107 ntBASIC12.23□□□□□ -0.45
Barx1Q9ER42 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC12.23□□□□□ -0.45
Barx1Q9ER42 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC12.23□□□□□ -0.45
Barx1Q9ER42 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Barx1Q9ER42 Gm9823-201ENSMUST00000051212 327 ntBASIC12.23□□□□□ -0.45
Barx1Q9ER42 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Barx1Q9ER42 Mbnl2-204ENSMUST00000227012 2390 ntBASIC12.23□□□□□ -0.45
Barx1Q9ER42 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Barx1Q9ER42 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Barx1Q9ER42 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Barx1Q9ER42 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Barx1Q9ER42 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Barx1Q9ER42 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Barx1Q9ER42 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Barx1Q9ER42 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Barx1Q9ER42 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Barx1Q9ER42 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Barx1Q9ER42 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Barx1Q9ER42 AC168058.1-201ENSMUST00000219521 2282 ntBASIC12.22□□□□□ -0.45
Barx1Q9ER42 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Barx1Q9ER42 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Barx1Q9ER42 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Barx1Q9ER42 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC12.22□□□□□ -0.45
Barx1Q9ER42 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Barx1Q9ER42 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC12.22□□□□□ -0.45
Barx1Q9ER42 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Barx1Q9ER42 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Barx1Q9ER42 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC12.22□□□□□ -0.45
Barx1Q9ER42 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC12.22□□□□□ -0.45
Barx1Q9ER42 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC12.22□□□□□ -0.45
Barx1Q9ER42 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Barx1Q9ER42 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC12.22□□□□□ -0.45
Barx1Q9ER42 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Barx1Q9ER42 Gm12203-201ENSMUST00000118235 598 ntBASIC12.22□□□□□ -0.45
Barx1Q9ER42 Gm12209-201ENSMUST00000120089 596 ntBASIC12.22□□□□□ -0.45
Barx1Q9ER42 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Barx1Q9ER42 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Barx1Q9ER42 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Barx1Q9ER42 Gm7584-201ENSMUST00000175829 940 ntBASIC12.22□□□□□ -0.45
Barx1Q9ER42 Gm27682-201ENSMUST00000183930 110 ntBASIC12.22□□□□□ -0.45
Barx1Q9ER42 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
Barx1Q9ER42 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC12.22□□□□□ -0.45
Barx1Q9ER42 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC12.22□□□□□ -0.45
Barx1Q9ER42 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Barx1Q9ER42 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Barx1Q9ER42 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Barx1Q9ER42 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Barx1Q9ER42 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Barx1Q9ER42 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Barx1Q9ER42 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 53.1 ms