Protein–RNA interactions for Protein: Q9CZ28

Snf8, Vacuolar-sorting protein SNF8, mousemouse

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snf8Q9CZ28 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Snf8Q9CZ28 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Snf8Q9CZ28 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Snf8Q9CZ28 Gm24543-201ENSMUST00000103867 82 ntBASIC13.94□□□□□ -0.18
Snf8Q9CZ28 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Snf8Q9CZ28 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Snf8Q9CZ28 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Snf8Q9CZ28 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Snf8Q9CZ28 Gm15460-201ENSMUST00000118147 391 ntBASIC13.94□□□□□ -0.18
Snf8Q9CZ28 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Snf8Q9CZ28 Gm11557-201ENSMUST00000120200 1008 ntBASIC13.94□□□□□ -0.18
Snf8Q9CZ28 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC13.94□□□□□ -0.18
Snf8Q9CZ28 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Snf8Q9CZ28 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC13.94□□□□□ -0.18
Snf8Q9CZ28 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC13.94□□□□□ -0.18
Snf8Q9CZ28 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Snf8Q9CZ28 Gm8927-201ENSMUST00000181978 981 ntBASIC13.94□□□□□ -0.18
Snf8Q9CZ28 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Snf8Q9CZ28 Gm21470-201ENSMUST00000187680 696 ntBASIC13.94□□□□□ -0.18
Snf8Q9CZ28 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
Snf8Q9CZ28 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Snf8Q9CZ28 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Snf8Q9CZ28 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Snf8Q9CZ28 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Snf8Q9CZ28 Gm3222-201ENSMUST00000071282 990 ntBASIC13.94□□□□□ -0.18
Snf8Q9CZ28 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Snf8Q9CZ28 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC13.94□□□□□ -0.18
Snf8Q9CZ28 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Snf8Q9CZ28 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Snf8Q9CZ28 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Snf8Q9CZ28 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Snf8Q9CZ28 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC13.94□□□□□ -0.18
Snf8Q9CZ28 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Snf8Q9CZ28 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Snf8Q9CZ28 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Snf8Q9CZ28 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Snf8Q9CZ28 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Snf8Q9CZ28 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Snf8Q9CZ28 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Snf8Q9CZ28 Tmed9-203ENSMUST00000224741 1450 ntBASIC13.93□□□□□ -0.18
Snf8Q9CZ28 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Snf8Q9CZ28 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Snf8Q9CZ28 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Snf8Q9CZ28 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Snf8Q9CZ28 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Snf8Q9CZ28 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Snf8Q9CZ28 Gm10176-201ENSMUST00000159707 2264 ntBASIC13.93□□□□□ -0.18
Snf8Q9CZ28 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Snf8Q9CZ28 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Snf8Q9CZ28 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Snf8Q9CZ28 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC13.93□□□□□ -0.18
Snf8Q9CZ28 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC13.93□□□□□ -0.18
Snf8Q9CZ28 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Snf8Q9CZ28 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Snf8Q9CZ28 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Snf8Q9CZ28 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Snf8Q9CZ28 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Snf8Q9CZ28 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC13.93□□□□□ -0.18
Snf8Q9CZ28 AC153872.1-201ENSMUST00000199539 128 ntBASIC13.93□□□□□ -0.18
Snf8Q9CZ28 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Snf8Q9CZ28 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Snf8Q9CZ28 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Snf8Q9CZ28 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC13.93□□□□□ -0.18
Snf8Q9CZ28 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Snf8Q9CZ28 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
Snf8Q9CZ28 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Snf8Q9CZ28 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Snf8Q9CZ28 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Snf8Q9CZ28 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Snf8Q9CZ28 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Snf8Q9CZ28 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Snf8Q9CZ28 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC13.93□□□□□ -0.18
Snf8Q9CZ28 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Snf8Q9CZ28 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Snf8Q9CZ28 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Snf8Q9CZ28 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
Snf8Q9CZ28 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Snf8Q9CZ28 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Snf8Q9CZ28 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Snf8Q9CZ28 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Snf8Q9CZ28 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Snf8Q9CZ28 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Snf8Q9CZ28 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Snf8Q9CZ28 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Snf8Q9CZ28 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Snf8Q9CZ28 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Snf8Q9CZ28 Gm13385-201ENSMUST00000121089 220 ntBASIC13.92□□□□□ -0.18
Snf8Q9CZ28 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC13.92□□□□□ -0.18
Snf8Q9CZ28 Gm37935-201ENSMUST00000192012 982 ntBASIC13.92□□□□□ -0.18
Snf8Q9CZ28 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC13.92□□□□□ -0.18
Snf8Q9CZ28 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Snf8Q9CZ28 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Snf8Q9CZ28 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Snf8Q9CZ28 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Snf8Q9CZ28 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Snf8Q9CZ28 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Snf8Q9CZ28 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Snf8Q9CZ28 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Snf8Q9CZ28 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
Snf8Q9CZ28 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC13.92□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms