Protein–RNA interactions for Protein: Q9CQ70

H2afb1, Histone H2A-Bbd type 1, mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1Q9CQ70 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
H2afb1Q9CQ70 Gm37171-201ENSMUST00000192636 1185 ntBASIC11.1□□□□□ -0.63
H2afb1Q9CQ70 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
H2afb1Q9CQ70 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
H2afb1Q9CQ70 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC11.1□□□□□ -0.63
H2afb1Q9CQ70 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
H2afb1Q9CQ70 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
H2afb1Q9CQ70 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
H2afb1Q9CQ70 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
H2afb1Q9CQ70 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC11.1□□□□□ -0.63
H2afb1Q9CQ70 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
H2afb1Q9CQ70 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
H2afb1Q9CQ70 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
H2afb1Q9CQ70 Gm42928-201ENSMUST00000197338 3339 ntBASIC11.1□□□□□ -0.63
H2afb1Q9CQ70 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
H2afb1Q9CQ70 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC11.1□□□□□ -0.63
H2afb1Q9CQ70 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
H2afb1Q9CQ70 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
H2afb1Q9CQ70 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
H2afb1Q9CQ70 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
H2afb1Q9CQ70 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC11.1□□□□□ -0.63
H2afb1Q9CQ70 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
H2afb1Q9CQ70 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
H2afb1Q9CQ70 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
H2afb1Q9CQ70 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
H2afb1Q9CQ70 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
H2afb1Q9CQ70 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
H2afb1Q9CQ70 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
H2afb1Q9CQ70 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
H2afb1Q9CQ70 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
H2afb1Q9CQ70 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC11.09□□□□□ -0.63
H2afb1Q9CQ70 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
H2afb1Q9CQ70 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
H2afb1Q9CQ70 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
H2afb1Q9CQ70 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
H2afb1Q9CQ70 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
H2afb1Q9CQ70 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
H2afb1Q9CQ70 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
H2afb1Q9CQ70 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
H2afb1Q9CQ70 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC11.09□□□□□ -0.63
H2afb1Q9CQ70 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
H2afb1Q9CQ70 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
H2afb1Q9CQ70 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
H2afb1Q9CQ70 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
H2afb1Q9CQ70 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
H2afb1Q9CQ70 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC11.09□□□□□ -0.63
H2afb1Q9CQ70 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC11.09□□□□□ -0.63
H2afb1Q9CQ70 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
H2afb1Q9CQ70 Cd63-ps-201ENSMUST00000145417 875 ntBASIC11.09□□□□□ -0.63
H2afb1Q9CQ70 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
H2afb1Q9CQ70 Gm17837-201ENSMUST00000186435 985 ntBASIC11.09□□□□□ -0.63
H2afb1Q9CQ70 Gm18905-201ENSMUST00000205454 928 ntBASIC11.09□□□□□ -0.63
H2afb1Q9CQ70 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
H2afb1Q9CQ70 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
H2afb1Q9CQ70 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
H2afb1Q9CQ70 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
H2afb1Q9CQ70 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
H2afb1Q9CQ70 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
H2afb1Q9CQ70 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
H2afb1Q9CQ70 Gm37844-201ENSMUST00000192473 4097 ntBASIC11.09□□□□□ -0.63
H2afb1Q9CQ70 Gm20632-201ENSMUST00000176760 2427 ntBASIC11.09□□□□□ -0.63
H2afb1Q9CQ70 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
H2afb1Q9CQ70 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC11.09□□□□□ -0.63
H2afb1Q9CQ70 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
H2afb1Q9CQ70 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
H2afb1Q9CQ70 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
H2afb1Q9CQ70 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
H2afb1Q9CQ70 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
H2afb1Q9CQ70 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
H2afb1Q9CQ70 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
H2afb1Q9CQ70 AC124751.1-201ENSMUST00000222716 1408 ntBASIC11.09□□□□□ -0.63
H2afb1Q9CQ70 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
H2afb1Q9CQ70 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
H2afb1Q9CQ70 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC11.09□□□□□ -0.63
H2afb1Q9CQ70 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
H2afb1Q9CQ70 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
H2afb1Q9CQ70 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC11.08□□□□□ -0.63
H2afb1Q9CQ70 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC11.08□□□□□ -0.63
H2afb1Q9CQ70 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
H2afb1Q9CQ70 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
H2afb1Q9CQ70 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
H2afb1Q9CQ70 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
H2afb1Q9CQ70 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
H2afb1Q9CQ70 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
H2afb1Q9CQ70 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
H2afb1Q9CQ70 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC11.08□□□□□ -0.64
H2afb1Q9CQ70 Gm43061-201ENSMUST00000198850 2241 ntBASIC11.08□□□□□ -0.64
H2afb1Q9CQ70 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
H2afb1Q9CQ70 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
H2afb1Q9CQ70 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
H2afb1Q9CQ70 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC11.08□□□□□ -0.64
H2afb1Q9CQ70 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
H2afb1Q9CQ70 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
H2afb1Q9CQ70 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
H2afb1Q9CQ70 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC11.08□□□□□ -0.64
H2afb1Q9CQ70 Gm15240-201ENSMUST00000118156 720 ntBASIC11.08□□□□□ -0.64
H2afb1Q9CQ70 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
H2afb1Q9CQ70 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC11.08□□□□□ -0.64
H2afb1Q9CQ70 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
H2afb1Q9CQ70 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms