Protein–RNA interactions for Protein: Q99J62

Rfc4, Replication factor C subunit 4, mousemouse

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc4Q99J62 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rfc4Q99J62 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rfc4Q99J62 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rfc4Q99J62 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC15.54■□□□□ 0.08
Rfc4Q99J62 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
Rfc4Q99J62 Gm10040-201ENSMUST00000080726 1662 ntBASIC15.54■□□□□ 0.08
Rfc4Q99J62 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Rfc4Q99J62 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Rfc4Q99J62 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rfc4Q99J62 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rfc4Q99J62 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rfc4Q99J62 Gm45684-201ENSMUST00000210244 1571 ntBASIC15.54■□□□□ 0.08
Rfc4Q99J62 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC15.54■□□□□ 0.08
Rfc4Q99J62 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rfc4Q99J62 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rfc4Q99J62 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Rfc4Q99J62 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC15.54■□□□□ 0.08
Rfc4Q99J62 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC15.54■□□□□ 0.08
Rfc4Q99J62 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC15.54■□□□□ 0.08
Rfc4Q99J62 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Rfc4Q99J62 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Rfc4Q99J62 Gm16379-201ENSMUST00000161469 348 ntBASIC15.54■□□□□ 0.08
Rfc4Q99J62 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC15.54■□□□□ 0.08
Rfc4Q99J62 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Rfc4Q99J62 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Rfc4Q99J62 Gm5850-201ENSMUST00000192923 1206 ntBASIC15.54■□□□□ 0.08
Rfc4Q99J62 Gm8762-201ENSMUST00000193486 339 ntBASIC15.54■□□□□ 0.08
Rfc4Q99J62 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC15.54■□□□□ 0.08
Rfc4Q99J62 Gm45865-201ENSMUST00000211815 945 ntBASIC15.54■□□□□ 0.08
Rfc4Q99J62 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC15.54■□□□□ 0.08
Rfc4Q99J62 AC173210.1-201ENSMUST00000222341 1131 ntBASIC15.54■□□□□ 0.08
Rfc4Q99J62 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rfc4Q99J62 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rfc4Q99J62 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rfc4Q99J62 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Rfc4Q99J62 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rfc4Q99J62 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rfc4Q99J62 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rfc4Q99J62 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC15.54■□□□□ 0.08
Rfc4Q99J62 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rfc4Q99J62 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rfc4Q99J62 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Rfc4Q99J62 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rfc4Q99J62 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rfc4Q99J62 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Rfc4Q99J62 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC15.54■□□□□ 0.08
Rfc4Q99J62 Gm20632-201ENSMUST00000176760 2427 ntBASIC15.54■□□□□ 0.08
Rfc4Q99J62 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC15.54■□□□□ 0.08
Rfc4Q99J62 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rfc4Q99J62 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rfc4Q99J62 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rfc4Q99J62 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rfc4Q99J62 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rfc4Q99J62 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rfc4Q99J62 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC15.53■□□□□ 0.08
Rfc4Q99J62 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rfc4Q99J62 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC15.53■□□□□ 0.08
Rfc4Q99J62 Ksr1-207ENSMUST00000226282 5260 ntBASIC15.53■□□□□ 0.08
Rfc4Q99J62 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC15.53■□□□□ 0.08
Rfc4Q99J62 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rfc4Q99J62 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Rfc4Q99J62 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Rfc4Q99J62 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Rfc4Q99J62 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Rfc4Q99J62 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC15.53■□□□□ 0.08
Rfc4Q99J62 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Rfc4Q99J62 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Rfc4Q99J62 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Rfc4Q99J62 Gm26083-201ENSMUST00000157904 193 ntBASIC15.53■□□□□ 0.08
Rfc4Q99J62 Gm16570-201ENSMUST00000161951 436 ntBASIC15.53■□□□□ 0.08
Rfc4Q99J62 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC15.53■□□□□ 0.08
Rfc4Q99J62 Gm7029-201ENSMUST00000173226 450 ntBASIC15.53■□□□□ 0.08
Rfc4Q99J62 Gm29396-201ENSMUST00000185659 716 ntBASIC15.53■□□□□ 0.08
Rfc4Q99J62 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC15.53■□□□□ 0.08
Rfc4Q99J62 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC15.53■□□□□ 0.08
Rfc4Q99J62 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC15.53■□□□□ 0.08
Rfc4Q99J62 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC15.53■□□□□ 0.08
Rfc4Q99J62 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rfc4Q99J62 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rfc4Q99J62 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rfc4Q99J62 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rfc4Q99J62 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Rfc4Q99J62 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Rfc4Q99J62 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC15.53■□□□□ 0.08
Rfc4Q99J62 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rfc4Q99J62 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rfc4Q99J62 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rfc4Q99J62 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rfc4Q99J62 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Rfc4Q99J62 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rfc4Q99J62 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rfc4Q99J62 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rfc4Q99J62 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC15.53■□□□□ 0.08
Rfc4Q99J62 Gm28182-201ENSMUST00000188354 2477 ntBASIC15.53■□□□□ 0.08
Rfc4Q99J62 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Rfc4Q99J62 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rfc4Q99J62 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rfc4Q99J62 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC15.52■□□□□ 0.08
Rfc4Q99J62 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rfc4Q99J62 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC15.52■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 70.3 ms