Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdha9Q91Y11 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdha9Q91Y11 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdha9Q91Y11 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Pcdha9Q91Y11 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC14.39□□□□□ -0.11
Pcdha9Q91Y11 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
Pcdha9Q91Y11 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdha9Q91Y11 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdha9Q91Y11 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
Pcdha9Q91Y11 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC14.38□□□□□ -0.11
Pcdha9Q91Y11 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Pcdha9Q91Y11 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdha9Q91Y11 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdha9Q91Y11 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdha9Q91Y11 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdha9Q91Y11 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdha9Q91Y11 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdha9Q91Y11 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdha9Q91Y11 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdha9Q91Y11 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdha9Q91Y11 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdha9Q91Y11 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdha9Q91Y11 AC154262.2-201ENSMUST00000224310 2293 ntBASIC14.38□□□□□ -0.11
Pcdha9Q91Y11 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdha9Q91Y11 Gm14928-201ENSMUST00000120198 477 ntBASIC14.38□□□□□ -0.11
Pcdha9Q91Y11 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
Pcdha9Q91Y11 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC14.38□□□□□ -0.11
Pcdha9Q91Y11 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdha9Q91Y11 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Pcdha9Q91Y11 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdha9Q91Y11 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Pcdha9Q91Y11 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdha9Q91Y11 Gm6983-201ENSMUST00000214912 628 ntBASIC14.38□□□□□ -0.11
Pcdha9Q91Y11 Gm7446-201ENSMUST00000221035 1240 ntBASIC14.38□□□□□ -0.11
Pcdha9Q91Y11 AC154239.3-201ENSMUST00000226933 674 ntBASIC14.38□□□□□ -0.11
Pcdha9Q91Y11 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdha9Q91Y11 Gm6180-201ENSMUST00000065243 498 ntBASIC14.38□□□□□ -0.11
Pcdha9Q91Y11 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdha9Q91Y11 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdha9Q91Y11 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdha9Q91Y11 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
Pcdha9Q91Y11 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdha9Q91Y11 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdha9Q91Y11 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdha9Q91Y11 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdha9Q91Y11 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdha9Q91Y11 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdha9Q91Y11 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdha9Q91Y11 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdha9Q91Y11 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdha9Q91Y11 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdha9Q91Y11 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdha9Q91Y11 Gm4782-201ENSMUST00000168705 2046 ntBASIC14.37□□□□□ -0.11
Pcdha9Q91Y11 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdha9Q91Y11 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdha9Q91Y11 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdha9Q91Y11 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdha9Q91Y11 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdha9Q91Y11 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC14.37□□□□□ -0.11
Pcdha9Q91Y11 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdha9Q91Y11 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Pcdha9Q91Y11 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdha9Q91Y11 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC14.37□□□□□ -0.11
Pcdha9Q91Y11 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC14.37□□□□□ -0.11
Pcdha9Q91Y11 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC14.37□□□□□ -0.11
Pcdha9Q91Y11 Gm12091-201ENSMUST00000146791 830 ntBASIC14.37□□□□□ -0.11
Pcdha9Q91Y11 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdha9Q91Y11 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC14.37□□□□□ -0.11
Pcdha9Q91Y11 Gm44397-201ENSMUST00000195950 113 ntBASIC14.37□□□□□ -0.11
Pcdha9Q91Y11 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdha9Q91Y11 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC14.37□□□□□ -0.11
Pcdha9Q91Y11 AC155252.1-201ENSMUST00000226462 1208 ntBASIC14.37□□□□□ -0.11
Pcdha9Q91Y11 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdha9Q91Y11 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdha9Q91Y11 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdha9Q91Y11 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdha9Q91Y11 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdha9Q91Y11 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdha9Q91Y11 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdha9Q91Y11 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdha9Q91Y11 Gm7899-201ENSMUST00000192935 1897 ntBASIC14.37□□□□□ -0.11
Pcdha9Q91Y11 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdha9Q91Y11 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdha9Q91Y11 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdha9Q91Y11 Gm9115-201ENSMUST00000120192 1348 ntBASIC14.37□□□□□ -0.11
Pcdha9Q91Y11 Tmed9-203ENSMUST00000224741 1450 ntBASIC14.37□□□□□ -0.11
Pcdha9Q91Y11 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdha9Q91Y11 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC14.37□□□□□ -0.11
Pcdha9Q91Y11 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Pcdha9Q91Y11 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdha9Q91Y11 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdha9Q91Y11 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdha9Q91Y11 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdha9Q91Y11 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Pcdha9Q91Y11 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC14.36□□□□□ -0.11
Pcdha9Q91Y11 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdha9Q91Y11 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdha9Q91Y11 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC14.36□□□□□ -0.11
Pcdha9Q91Y11 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC14.36□□□□□ -0.11
Pcdha9Q91Y11 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 73.7 ms