Protein–RNA interactions for Protein: Q91V10

Vsx1, Visual system homeobox 1, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx1Q91V10 Gm10710-201ENSMUST00000047876 3971 ntBASIC13.37□□□□□ -0.27
Vsx1Q91V10 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Vsx1Q91V10 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
Vsx1Q91V10 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vsx1Q91V10 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vsx1Q91V10 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vsx1Q91V10 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vsx1Q91V10 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vsx1Q91V10 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Vsx1Q91V10 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vsx1Q91V10 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vsx1Q91V10 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vsx1Q91V10 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC13.36□□□□□ -0.27
Vsx1Q91V10 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vsx1Q91V10 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vsx1Q91V10 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vsx1Q91V10 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Vsx1Q91V10 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Vsx1Q91V10 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vsx1Q91V10 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vsx1Q91V10 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC13.36□□□□□ -0.27
Vsx1Q91V10 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Vsx1Q91V10 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC13.36□□□□□ -0.27
Vsx1Q91V10 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Vsx1Q91V10 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC13.36□□□□□ -0.27
Vsx1Q91V10 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC13.36□□□□□ -0.27
Vsx1Q91V10 Gm2383-201ENSMUST00000181461 807 ntBASIC13.36□□□□□ -0.27
Vsx1Q91V10 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Vsx1Q91V10 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC13.36□□□□□ -0.27
Vsx1Q91V10 Gm29396-201ENSMUST00000185659 716 ntBASIC13.36□□□□□ -0.27
Vsx1Q91V10 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC13.36□□□□□ -0.27
Vsx1Q91V10 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Vsx1Q91V10 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vsx1Q91V10 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vsx1Q91V10 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vsx1Q91V10 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vsx1Q91V10 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vsx1Q91V10 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vsx1Q91V10 Gm42769-201ENSMUST00000198576 1659 ntBASIC13.36□□□□□ -0.27
Vsx1Q91V10 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC13.36□□□□□ -0.27
Vsx1Q91V10 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vsx1Q91V10 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vsx1Q91V10 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Vsx1Q91V10 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vsx1Q91V10 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vsx1Q91V10 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vsx1Q91V10 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vsx1Q91V10 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vsx1Q91V10 Gm6203-201ENSMUST00000209575 1342 ntBASIC13.36□□□□□ -0.27
Vsx1Q91V10 Gm5620-201ENSMUST00000077991 1348 ntBASIC13.36□□□□□ -0.27
Vsx1Q91V10 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vsx1Q91V10 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vsx1Q91V10 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vsx1Q91V10 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vsx1Q91V10 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vsx1Q91V10 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vsx1Q91V10 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Vsx1Q91V10 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC13.35□□□□□ -0.27
Vsx1Q91V10 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vsx1Q91V10 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vsx1Q91V10 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vsx1Q91V10 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vsx1Q91V10 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC13.35□□□□□ -0.27
Vsx1Q91V10 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC13.35□□□□□ -0.27
Vsx1Q91V10 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC13.35□□□□□ -0.27
Vsx1Q91V10 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Vsx1Q91V10 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Vsx1Q91V10 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC13.35□□□□□ -0.27
Vsx1Q91V10 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC13.35□□□□□ -0.27
Vsx1Q91V10 AC102291.3-201ENSMUST00000226566 405 ntBASIC13.35□□□□□ -0.27
Vsx1Q91V10 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vsx1Q91V10 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Vsx1Q91V10 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vsx1Q91V10 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vsx1Q91V10 Gm44207-201ENSMUST00000204568 1424 ntBASIC13.35□□□□□ -0.27
Vsx1Q91V10 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Vsx1Q91V10 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vsx1Q91V10 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vsx1Q91V10 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vsx1Q91V10 AC159196.2-201ENSMUST00000224082 1622 ntBASIC13.35□□□□□ -0.27
Vsx1Q91V10 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vsx1Q91V10 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vsx1Q91V10 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Vsx1Q91V10 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
Vsx1Q91V10 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vsx1Q91V10 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Vsx1Q91V10 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vsx1Q91V10 Gm13369-201ENSMUST00000119442 987 ntBASIC13.34□□□□□ -0.27
Vsx1Q91V10 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC13.34□□□□□ -0.27
Vsx1Q91V10 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC13.34□□□□□ -0.27
Vsx1Q91V10 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC13.34□□□□□ -0.27
Vsx1Q91V10 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC13.34□□□□□ -0.27
Vsx1Q91V10 Gm25261-201ENSMUST00000157416 134 ntBASIC13.34□□□□□ -0.27
Vsx1Q91V10 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC13.34□□□□□ -0.27
Vsx1Q91V10 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vsx1Q91V10 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vsx1Q91V10 Gm8706-201ENSMUST00000197372 1491 ntBASIC13.34□□□□□ -0.27
Vsx1Q91V10 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Vsx1Q91V10 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
Vsx1Q91V10 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms