Protein–RNA interactions for Protein: Q8VI88

Odf4, Outer dense fiber protein 4, mousemouse

Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Odf4Q8VI88 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
Odf4Q8VI88 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC12.16□□□□□ -0.46
Odf4Q8VI88 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC12.16□□□□□ -0.46
Odf4Q8VI88 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Odf4Q8VI88 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC12.16□□□□□ -0.46
Odf4Q8VI88 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Odf4Q8VI88 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Odf4Q8VI88 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Odf4Q8VI88 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Odf4Q8VI88 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Odf4Q8VI88 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Odf4Q8VI88 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Odf4Q8VI88 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Odf4Q8VI88 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Odf4Q8VI88 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Odf4Q8VI88 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Odf4Q8VI88 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Odf4Q8VI88 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Odf4Q8VI88 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Odf4Q8VI88 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Odf4Q8VI88 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Odf4Q8VI88 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Odf4Q8VI88 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Odf4Q8VI88 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Odf4Q8VI88 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Odf4Q8VI88 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Odf4Q8VI88 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Odf4Q8VI88 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC12.15□□□□□ -0.46
Odf4Q8VI88 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Odf4Q8VI88 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Odf4Q8VI88 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Odf4Q8VI88 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Odf4Q8VI88 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Odf4Q8VI88 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Odf4Q8VI88 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Odf4Q8VI88 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Odf4Q8VI88 Gm8749-201ENSMUST00000117737 331 ntBASIC12.15□□□□□ -0.46
Odf4Q8VI88 Gm15653-201ENSMUST00000119247 907 ntBASIC12.15□□□□□ -0.46
Odf4Q8VI88 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC12.15□□□□□ -0.46
Odf4Q8VI88 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC12.15□□□□□ -0.46
Odf4Q8VI88 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Odf4Q8VI88 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Odf4Q8VI88 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Odf4Q8VI88 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.46
Odf4Q8VI88 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Odf4Q8VI88 Gm44414-201ENSMUST00000203660 2109 ntBASIC12.15□□□□□ -0.46
Odf4Q8VI88 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC12.15□□□□□ -0.46
Odf4Q8VI88 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Odf4Q8VI88 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Odf4Q8VI88 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC12.15□□□□□ -0.46
Odf4Q8VI88 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC12.15□□□□□ -0.46
Odf4Q8VI88 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Odf4Q8VI88 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Odf4Q8VI88 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC12.15□□□□□ -0.46
Odf4Q8VI88 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Odf4Q8VI88 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Odf4Q8VI88 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Odf4Q8VI88 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Odf4Q8VI88 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Odf4Q8VI88 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Odf4Q8VI88 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Odf4Q8VI88 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Odf4Q8VI88 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Odf4Q8VI88 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Odf4Q8VI88 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Odf4Q8VI88 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Odf4Q8VI88 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Odf4Q8VI88 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.47
Odf4Q8VI88 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Odf4Q8VI88 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Odf4Q8VI88 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Odf4Q8VI88 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Odf4Q8VI88 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Odf4Q8VI88 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Odf4Q8VI88 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC12.14□□□□□ -0.47
Odf4Q8VI88 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC12.14□□□□□ -0.47
Odf4Q8VI88 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Odf4Q8VI88 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Odf4Q8VI88 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Odf4Q8VI88 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Odf4Q8VI88 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC12.14□□□□□ -0.47
Odf4Q8VI88 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC12.14□□□□□ -0.47
Odf4Q8VI88 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Odf4Q8VI88 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Odf4Q8VI88 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Odf4Q8VI88 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC12.14□□□□□ -0.47
Odf4Q8VI88 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Odf4Q8VI88 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Odf4Q8VI88 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Odf4Q8VI88 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Odf4Q8VI88 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Odf4Q8VI88 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Odf4Q8VI88 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC12.14□□□□□ -0.47
Odf4Q8VI88 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC12.14□□□□□ -0.47
Odf4Q8VI88 Gm6218-201ENSMUST00000219812 628 ntBASIC12.14□□□□□ -0.47
Odf4Q8VI88 Gm16476-201ENSMUST00000221544 139 ntBASIC12.14□□□□□ -0.47
Odf4Q8VI88 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Odf4Q8VI88 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Odf4Q8VI88 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Odf4Q8VI88 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 96.7 ms