Protein–RNA interactions for Protein: Q8VEJ9

Vps4a, Vacuolar protein sorting-associated protein 4A, mousemouse

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4aQ8VEJ9 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Vps4aQ8VEJ9 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC13.18□□□□□ -0.3
Vps4aQ8VEJ9 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Vps4aQ8VEJ9 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Vps4aQ8VEJ9 Gm8602-201ENSMUST00000184045 607 ntBASIC13.18□□□□□ -0.3
Vps4aQ8VEJ9 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC13.18□□□□□ -0.3
Vps4aQ8VEJ9 Gm38319-201ENSMUST00000194537 1266 ntBASIC13.18□□□□□ -0.3
Vps4aQ8VEJ9 Gm45453-201ENSMUST00000211758 853 ntBASIC13.18□□□□□ -0.3
Vps4aQ8VEJ9 AC090659.2-201ENSMUST00000225378 1186 ntBASIC13.18□□□□□ -0.3
Vps4aQ8VEJ9 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Vps4aQ8VEJ9 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vps4aQ8VEJ9 Gm6180-201ENSMUST00000065243 498 ntBASIC13.18□□□□□ -0.3
Vps4aQ8VEJ9 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vps4aQ8VEJ9 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC13.18□□□□□ -0.3
Vps4aQ8VEJ9 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Vps4aQ8VEJ9 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vps4aQ8VEJ9 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Vps4aQ8VEJ9 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vps4aQ8VEJ9 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vps4aQ8VEJ9 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Vps4aQ8VEJ9 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Vps4aQ8VEJ9 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Vps4aQ8VEJ9 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vps4aQ8VEJ9 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vps4aQ8VEJ9 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vps4aQ8VEJ9 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Vps4aQ8VEJ9 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vps4aQ8VEJ9 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Vps4aQ8VEJ9 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Vps4aQ8VEJ9 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC13.17□□□□□ -0.3
Vps4aQ8VEJ9 Gm44065-201ENSMUST00000203184 3527 ntBASIC13.17□□□□□ -0.3
Vps4aQ8VEJ9 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vps4aQ8VEJ9 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vps4aQ8VEJ9 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vps4aQ8VEJ9 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Vps4aQ8VEJ9 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Vps4aQ8VEJ9 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC13.17□□□□□ -0.3
Vps4aQ8VEJ9 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vps4aQ8VEJ9 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vps4aQ8VEJ9 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vps4aQ8VEJ9 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Vps4aQ8VEJ9 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Vps4aQ8VEJ9 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Vps4aQ8VEJ9 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC13.17□□□□□ -0.3
Vps4aQ8VEJ9 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC13.17□□□□□ -0.3
Vps4aQ8VEJ9 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Vps4aQ8VEJ9 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Vps4aQ8VEJ9 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vps4aQ8VEJ9 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC13.17□□□□□ -0.3
Vps4aQ8VEJ9 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Vps4aQ8VEJ9 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vps4aQ8VEJ9 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC13.17□□□□□ -0.3
Vps4aQ8VEJ9 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vps4aQ8VEJ9 Gm9899-201ENSMUST00000065519 555 ntBASIC13.17□□□□□ -0.3
Vps4aQ8VEJ9 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Vps4aQ8VEJ9 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vps4aQ8VEJ9 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vps4aQ8VEJ9 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Vps4aQ8VEJ9 Mbnl2-204ENSMUST00000227012 2390 ntBASIC13.17□□□□□ -0.3
Vps4aQ8VEJ9 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Vps4aQ8VEJ9 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Vps4aQ8VEJ9 Gm5320-201ENSMUST00000207163 1519 ntBASIC13.17□□□□□ -0.3
Vps4aQ8VEJ9 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Vps4aQ8VEJ9 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vps4aQ8VEJ9 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vps4aQ8VEJ9 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC13.17□□□□□ -0.3
Vps4aQ8VEJ9 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Vps4aQ8VEJ9 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vps4aQ8VEJ9 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vps4aQ8VEJ9 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vps4aQ8VEJ9 Gm9115-201ENSMUST00000120192 1348 ntBASIC13.16□□□□□ -0.3
Vps4aQ8VEJ9 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Vps4aQ8VEJ9 AC155298.2-201ENSMUST00000225485 6226 ntBASIC13.16□□□□□ -0.3
Vps4aQ8VEJ9 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vps4aQ8VEJ9 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Vps4aQ8VEJ9 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Vps4aQ8VEJ9 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Vps4aQ8VEJ9 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Vps4aQ8VEJ9 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Vps4aQ8VEJ9 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vps4aQ8VEJ9 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Vps4aQ8VEJ9 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Vps4aQ8VEJ9 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Vps4aQ8VEJ9 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Vps4aQ8VEJ9 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC13.16□□□□□ -0.3
Vps4aQ8VEJ9 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC13.16□□□□□ -0.3
Vps4aQ8VEJ9 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC13.16□□□□□ -0.3
Vps4aQ8VEJ9 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vps4aQ8VEJ9 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Vps4aQ8VEJ9 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC13.16□□□□□ -0.3
Vps4aQ8VEJ9 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Vps4aQ8VEJ9 Gm27631-201ENSMUST00000184163 466 ntBASIC13.16□□□□□ -0.3
Vps4aQ8VEJ9 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vps4aQ8VEJ9 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vps4aQ8VEJ9 Gm20445-201ENSMUST00000061905 565 ntBASIC13.16□□□□□ -0.3
Vps4aQ8VEJ9 Mir125a-201ENSMUST00000083545 68 ntBASIC13.16□□□□□ -0.3
Vps4aQ8VEJ9 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vps4aQ8VEJ9 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
Vps4aQ8VEJ9 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vps4aQ8VEJ9 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms