Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Vps39Q8R5L3 AC139350.1-201ENSMUST00000227064 1594 ntBASIC13.58□□□□□ -0.24
Vps39Q8R5L3 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Vps39Q8R5L3 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Vps39Q8R5L3 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vps39Q8R5L3 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Vps39Q8R5L3 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Vps39Q8R5L3 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Vps39Q8R5L3 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vps39Q8R5L3 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vps39Q8R5L3 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vps39Q8R5L3 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Vps39Q8R5L3 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Vps39Q8R5L3 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vps39Q8R5L3 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vps39Q8R5L3 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vps39Q8R5L3 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC13.57□□□□□ -0.24
Vps39Q8R5L3 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Vps39Q8R5L3 Gm42928-201ENSMUST00000197338 3339 ntBASIC13.57□□□□□ -0.24
Vps39Q8R5L3 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vps39Q8R5L3 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Vps39Q8R5L3 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Vps39Q8R5L3 Gm15770-201ENSMUST00000117498 584 ntBASIC13.57□□□□□ -0.24
Vps39Q8R5L3 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC13.57□□□□□ -0.24
Vps39Q8R5L3 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC13.57□□□□□ -0.24
Vps39Q8R5L3 Cd63-ps-201ENSMUST00000145417 875 ntBASIC13.57□□□□□ -0.24
Vps39Q8R5L3 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC13.57□□□□□ -0.24
Vps39Q8R5L3 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vps39Q8R5L3 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vps39Q8R5L3 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vps39Q8R5L3 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vps39Q8R5L3 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vps39Q8R5L3 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vps39Q8R5L3 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vps39Q8R5L3 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Vps39Q8R5L3 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC13.57□□□□□ -0.24
Vps39Q8R5L3 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vps39Q8R5L3 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vps39Q8R5L3 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vps39Q8R5L3 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Vps39Q8R5L3 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Vps39Q8R5L3 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vps39Q8R5L3 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC13.57□□□□□ -0.24
Vps39Q8R5L3 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vps39Q8R5L3 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Vps39Q8R5L3 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Vps39Q8R5L3 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Vps39Q8R5L3 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vps39Q8R5L3 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Vps39Q8R5L3 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Vps39Q8R5L3 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Vps39Q8R5L3 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vps39Q8R5L3 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Vps39Q8R5L3 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vps39Q8R5L3 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC13.56□□□□□ -0.24
Vps39Q8R5L3 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vps39Q8R5L3 Gm13730-201ENSMUST00000121036 1462 ntBASIC13.56□□□□□ -0.24
Vps39Q8R5L3 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC13.56□□□□□ -0.24
Vps39Q8R5L3 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vps39Q8R5L3 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Vps39Q8R5L3 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC13.56□□□□□ -0.24
Vps39Q8R5L3 Gm13616-201ENSMUST00000120600 222 ntBASIC13.56□□□□□ -0.24
Vps39Q8R5L3 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Vps39Q8R5L3 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC13.56□□□□□ -0.24
Vps39Q8R5L3 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Vps39Q8R5L3 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
Vps39Q8R5L3 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Vps39Q8R5L3 Grk6-205ENSMUST00000224653 2976 ntBASIC13.56□□□□□ -0.24
Vps39Q8R5L3 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vps39Q8R5L3 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vps39Q8R5L3 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vps39Q8R5L3 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vps39Q8R5L3 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vps39Q8R5L3 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Vps39Q8R5L3 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vps39Q8R5L3 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vps39Q8R5L3 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vps39Q8R5L3 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC13.56□□□□□ -0.24
Vps39Q8R5L3 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Vps39Q8R5L3 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC13.56□□□□□ -0.24
Vps39Q8R5L3 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Vps39Q8R5L3 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vps39Q8R5L3 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vps39Q8R5L3 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vps39Q8R5L3 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Vps39Q8R5L3 AC154725.1-201ENSMUST00000224826 1961 ntBASIC13.56□□□□□ -0.24
Vps39Q8R5L3 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vps39Q8R5L3 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vps39Q8R5L3 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vps39Q8R5L3 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vps39Q8R5L3 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vps39Q8R5L3 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vps39Q8R5L3 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Vps39Q8R5L3 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vps39Q8R5L3 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC13.56□□□□□ -0.24
Vps39Q8R5L3 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vps39Q8R5L3 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vps39Q8R5L3 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vps39Q8R5L3 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vps39Q8R5L3 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 60.3 ms